RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 OR4A15Q8NGL6 344 aa13.5□□□□□ -0.25
PRKN-207ENST00000479615 OR5AK3PQ8NH89 298 aa13.5□□□□□ -0.25
PRKN-207ENST00000479615 NRGNQ92686 78 aa13.5□□□□□ -0.25
PRKN-207ENST00000479615 OSTF1Q92882 214 aa13.5□□□□□ -0.25
PRKN-207ENST00000479615 SLC35G5Q96KT7 338 aa13.5□□□□□ -0.25
PRKN-207ENST00000479615 PAIP2Q9BPZ3 127 aaKnown RBP13.5□□□□□ -0.25
PRKN-207ENST00000479615 TACO1Q9BSH4 297 aaKnown RBP13.5□□□□□ -0.25
PRKN-207ENST00000479615 MED18Q9BUE0 208 aa13.5□□□□□ -0.25
PRKN-207ENST00000479615 NUF2Q9BZD4 464 aa13.5□□□□□ -0.25
PRKN-207ENST00000479615 C20orf27Q9GZN8 174 aa13.5□□□□□ -0.25
PRKN-207ENST00000479615 OPN3Q9H1Y3 402 aaPredicted RBP13.5□□□□□ -0.25
PRKN-207ENST00000479615 OR10A4Q9H209 315 aa13.5□□□□□ -0.25
PRKN-207ENST00000479615 ZNF395Q9H8N7 513 aaPredicted RBP13.5□□□□□ -0.25
PRKN-207ENST00000479615 CARD8Q9Y2G2 431 aa13.5□□□□□ -0.25
PRKN-207ENST00000479615 KIAA1549Q9HCM3 1950 aa13.5□□□□□ -0.25
PRKN-207ENST00000479615 SERINC4A6NH21 518 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 SHISA8B8ZZ34 492 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 E9PBE3 544 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 ETV2O00321 342 aaPredicted RBP13.49□□□□□ -0.25
PRKN-207ENST00000479615 TNFSF11O14788 317 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 HDAC3O15379 428 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 CXCL13O43927 109 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 SCN2BO60939 215 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 UBL4AP11441 157 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 CRYGSP22914 178 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 FKBP2P26885 142 aaKnown RBP13.49□□□□□ -0.25
PRKN-207ENST00000479615 S100A3P33764 101 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 MAGEA8P43361 318 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 PPP2R2AP63151 447 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 BST1Q10588 318 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 SELENBP1Q13228 472 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 MPP2Q14168 576 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 SLC25A53Q5H9E4 307 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 HEPHL1Q6MZM0 1159 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 PPP4R4Q6NUP7 873 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 EIF3MQ7L2H7 374 aaKnown RBP13.49□□□□□ -0.25
PRKN-207ENST00000479615 SLC43A2Q8N370 569 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 ZNF614Q8N883 585 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 ZNF610Q8N9Z0 462 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 GLB1L3Q8NCI6 653 aaPredicted RBP13.49□□□□□ -0.25
PRKN-207ENST00000479615 POC1BQ8TC44 478 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 GPR119Q8TDV5 335 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 TMEM234Q8WY98 164 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 ST8SIA1Q92185 356 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 PPP1R36Q96LQ0 422 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 WFIKKN1Q96NZ8 548 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 USB1Q9BQ65 265 aaKnown RBP13.49□□□□□ -0.25
PRKN-207ENST00000479615 ZNF350Q9GZX5 532 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 LAT2Q9GZY6 243 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 SERINC1Q9NRX5 453 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 NKIRAS1Q9NYS0 192 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 BTNL2Q9UIR0 455 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 PRDM4Q9UKN5 801 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 PLEKHA6Q9Y2H5 1048 aa13.49□□□□□ -0.25
PRKN-207ENST00000479615 A0A0J9YW62 118 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 ANKRD28O15084 1053 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 DNAJA2O60884 412 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 PRKCAP17252 672 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 FOXF1Q12946 379 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 CASP8Q14790 479 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.48□□□□□ -0.25
PRKN-207ENST00000479615 CBLN3Q6UW01 205 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 TGIF2LYQ8IUE0 185 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 CLECL1Q8IZS7 167 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 OR5D16Q8NGK9 328 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 FBXO27Q8NI29 283 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 PMM1Q92871 262 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 NEURL3Q96EH8 262 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 CCDC115Q96NT0 180 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 ZBTB18Q99592 522 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 HDHD5Q9BXW7 423 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 LIME1Q9H400 295 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 BEX4Q9NWD9 120 aaPredicted RBP13.48□□□□□ -0.25
PRKN-207ENST00000479615 LIPT1Q9Y234 373 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 SLC35A3Q9Y2D2 325 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 KCNE3Q9Y6H6 103 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 MED12LQ86YW9 2145 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 HIVEP1P15822 2718 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 MPDZO75970 2070 aa13.48□□□□□ -0.25
PRKN-207ENST00000479615 TMEM120BA0PK00 339 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 PRKD3O94806 890 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 ATE1O95260 518 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 NTN1O95631 604 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 CD99P14209 185 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 PGCP20142 388 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 FPR1P21462 350 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 CHI3L1P36222 383 aaPredicted RBP13.47□□□□□ -0.25
PRKN-207ENST00000479615 SLC6A8P48029 635 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 KHKP50053 298 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 RAC3P60763 192 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 HPCAP84074 193 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 GPR68Q15743 365 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 ZNF239Q16600 458 aaKnown RBP13.47□□□□□ -0.25
PRKN-207ENST00000479615 DEFB113Q30KQ7 82 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 TMEM201Q5SNT2 666 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 PDZK1Q5T2W1 519 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 SAXO2Q658L1 398 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 C3orf33Q6P1S2 294 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 ANKRD42Q8N9B4 389 aa13.47□□□□□ -0.25
PRKN-207ENST00000479615 RNF128Q8TEB7 428 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms