RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 SKP2Q13309 424 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 MAPRE2Q15555 327 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 MAPK11Q15759 364 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 HSPB2Q16082 182 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 MAPK14Q16539 360 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 SYPL1Q16563 259 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 DCST1Q5T197 706 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 RAET1LQ5VY80 246 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 CBLN3Q6UW01 205 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 ARSKQ6UWY0 536 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 DNAJC14Q6Y2X3 702 aaPredicted RBP13.98□□□□□ -0.17
C9orf3-217ENST00000479161 C3P1Q6ZMU1 363 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 GRAMD2AQ8IUY3 354 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 ANKFN1Q8N957 763 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 GPR119Q8TDV5 335 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 C10orf82Q8WW14 230 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 ST8SIA1Q92185 356 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 WNT2BQ93097 391 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 SLC35B4Q969S0 331 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 MRGPRX4Q96LA9 322 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 TMEM38AQ9H6F2 299 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 CHST11Q9NPF2 352 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 SLAMF8Q9P0V8 285 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 TNFRSF10DQ9UBN6 386 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 ZNF629Q9UEG4 869 aaPredicted RBP13.98□□□□□ -0.17
C9orf3-217ENST00000479161 CAMK2AQ9UQM7 478 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 ZNF337Q9Y3M9 751 aa13.98□□□□□ -0.17
C9orf3-217ENST00000479161 NPIPA5A0A0B4J1W7 369 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 NPIPA7E9PJI5 369 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 FAAHO00519 579 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 CLDN1O95832 211 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 THBS1P07996 1170 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 NPIPA8P0DM63 369 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 NID1P14543 1247 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 ETS2P15036 469 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 FKBP2P26885 142 aaKnown RBP13.97□□□□□ -0.17
C9orf3-217ENST00000479161 SLC6A8P48029 635 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 CBFBQ13951 182 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 GTDC1Q4AE62 458 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 RUNDC3AQ59EK9 446 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 SEM1Q6ZVN7 128 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 PEX5LQ8IYB4 626 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 MEIOBQ8N635 442 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 GATSQ8NAP1 163 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 PNPT1Q8TCS8 783 aaKnown RBP13.97□□□□□ -0.17
C9orf3-217ENST00000479161 TMEM234Q8WY98 164 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 ZG16BQ96DA0 208 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 AURKBQ96GD4 344 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-217ENST00000479161 ANKRD27Q96NW4 1050 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 TM9SF2Q99805 663 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 TREX2Q9BQ50 279 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-217ENST00000479161 RUBCNLQ9H714 662 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 RNF6Q9Y252 685 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 CARD8Q9Y2G2 431 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 RPH3AQ9Y2J0 694 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-217ENST00000479161 ADGRG4Q8IZF6 3080 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 HCFC1P51610 2035 aa13.97□□□□□ -0.17
C9orf3-217ENST00000479161 PKDREJQ9NTG1 2253 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 ADAMDEC1O15204 470 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 CCDC22O60826 627 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 IL18BPO95998 194 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 IL2RAP01589 272 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 CRHP06850 196 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 PGCP20142 388 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 POU3F2P20265 443 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-217ENST00000479161 LSP1P33241 339 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 MAP2K6P52564 334 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 KLF10Q13118 480 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 RNF220Q5VTB9 566 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 ZNF440Q8IYI8 595 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 RPRMLQ8N4K4 120 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 ACBD4Q8NC06 268 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 CA5BP1Q8WTZ4 195 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 SDCCAG3Q96C92 435 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 SH3YL1Q96HL8 342 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-217ENST00000479161 CGREF1Q99674 301 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 TUBA1CQ9BQE3 449 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 ALKBH4Q9NXW9 302 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 CLCF1Q9UBD9 225 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 ZNF232Q9UNY5 417 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 IFT52Q9Y366 437 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 ZNF175Q9Y473 711 aa13.96□□□□□ -0.17
C9orf3-217ENST00000479161 CENPEQ02224 2701 aa13.96□□□□□ -0.18
C9orf3-217ENST00000479161 A0A0G2JNJ9 132 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 CENPVL1A0A0U1RR11 272 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 GMNCA6NCL1 334 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 H0Y3Z8 333 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 TOXO94900 526 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 RCBTB2O95199 551 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 ARAFP10398 606 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 CD1EP15812 388 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 IL7RP16871 459 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 PRKCAP17252 672 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 STARP49675 285 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 CLDN15P56746 228 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 RPS3AP61247 264 aaKnown RBP13.95□□□□□ -0.18
C9orf3-217ENST00000479161 RBBP4Q09028 425 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 CYLC2Q14093 348 aaPredicted RBP13.95□□□□□ -0.18
C9orf3-217ENST00000479161 SLC25A35Q3KQZ1 300 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms