RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 STIP1P31948 543 aaKnown RBP-0.28□□□□□ -2.45
CALD1-218ENST00000478075 FRKP42685 505 aaPredicted RBP-0.28□□□□□ -2.45
CALD1-218ENST00000478075 ACADSBP45954 432 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 TAS2R19P59542 299 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 RPS11P62280 158 aaKnown RBP eCLIP-0.28□□□□□ -2.45
CALD1-218ENST00000478075 COG2Q14746 738 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 GPR139Q6DWJ6 353 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 CD164L2Q6UWJ8 174 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 STAC2Q6ZMT1 411 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 SPATA21Q7Z572 469 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 PRPF39Q86UA1 669 aaKnown RBP-0.28□□□□□ -2.45
CALD1-218ENST00000478075 OR2L3Q8NG85 312 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 UBLCP1Q8WVY7 318 aaPredicted RBP-0.28□□□□□ -2.45
CALD1-218ENST00000478075 RTN4IP1Q8WWV3 396 aaPredicted RBP-0.28□□□□□ -2.45
CALD1-218ENST00000478075 GLYATL1Q969I3 302 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 RMDN1Q96DB5 314 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 FERMT1Q9BQL6 677 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 NAA11Q9BSU3 229 aaPredicted RBP-0.28□□□□□ -2.45
CALD1-218ENST00000478075 FUNDC2Q9BWH2 189 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 STARD5Q9NSY2 213 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 CRLS1Q9UJA2 301 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 RIMS3Q9UJD0 308 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 TMEM14AQ9Y6G1 99 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 TRIP11Q15643 1979 aa-0.28□□□□□ -2.45
CALD1-218ENST00000478075 LGALS9O00182 355 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 HCRTR1O43613 425 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 IGLV2-23P01705 113 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 FAM58BPP0C7Q3 252 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 ALPPL2P10696 532 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 NPY4RP50391 375 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 PITPNAQ00169 270 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 ZNF616Q08AN1 781 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 ST3GAL3Q11203 375 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 NPRL3Q12980 569 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 STX1AQ16623 288 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 IL23RQ5VWK5 629 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 C1orf122Q6ZSJ8 110 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 IFNEQ86WN2 208 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 BPIFB2Q8N4F0 458 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 ACER1Q8TDN7 264 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 MRPS27Q92552 414 aaKnown RBP-0.29□□□□□ -2.46
CALD1-218ENST00000478075 OR2A5Q96R48 311 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 TSPAN18Q96SJ8 248 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 RNF5Q99942 180 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 RPP21Q9H633 154 aaKnown RBP-0.29□□□□□ -2.46
CALD1-218ENST00000478075 SLC40A1Q9NP59 571 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 DDX28Q9NUL7 540 aaKnown RBP-0.29□□□□□ -2.46
CALD1-218ENST00000478075 DCAF13Q9NV06 445 aaKnown RBP-0.29□□□□□ -2.46
CALD1-218ENST00000478075 ZNRD1Q9P1U0 126 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 MED13Q9UHV7 2174 aa-0.29□□□□□ -2.46
CALD1-218ENST00000478075 ZNF705EA8MWA4 302 aaPredicted RBP-0.3□□□□□ -2.46
CALD1-218ENST00000478075 TM9SF1O15321 606 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 CD5LO43866 347 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 EIF5BO60841 1220 aaKnown RBP-0.3□□□□□ -2.46
CALD1-218ENST00000478075 SUPT3HO75486 399 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 CCNKO75909 580 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 GLCEO94923 617 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 SLC16A8O95907 504 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 ACTN2P35609 894 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 DEFB103AP81534 67 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 PRKCDQ05655 676 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 CDC20Q12834 499 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 CYBRD1Q53TN4 286 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 CASC4Q6P4E1 433 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 WDR86Q86TI4 376 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 ZSCAN30Q86W11 494 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 MFSD6LQ8IWD5 586 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 KLHDC8AQ8IYD2 350 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 DTX3LQ8TDB6 740 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 L3HYPDHQ96EM0 354 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 CCDC68Q9H2F9 335 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 GPR34Q9UPC5 381 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 MRPS33Q9Y291 106 aaKnown RBP-0.3□□□□□ -2.46
CALD1-218ENST00000478075 SIGLEC9Q9Y336 463 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 PLLPQ9Y342 182 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 ICE1Q9Y2F5 2266 aa-0.3□□□□□ -2.46
CALD1-218ENST00000478075 ZFHX2Q9C0A1 2572 aaPredicted RBP-0.31□□□□□ -2.46
CALD1-218ENST00000478075 LOC100131303A0A0U1RQF7 123 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 HTR3EA5X5Y0 456 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 SPECC1L-ADORA2AF8WAN1 911 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 ARPC1BO15143 372 aaKnown RBP-0.31□□□□□ -2.46
CALD1-218ENST00000478075 B4GALT1P15291 398 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 FCARP24071 287 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 CCND3P30281 292 aaPredicted RBP-0.31□□□□□ -2.46
CALD1-218ENST00000478075 EMDP50402 254 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 GEMP55040 296 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 SMARCB1Q12824 385 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 AIMP1Q12904 312 aaKnown RBP-0.31□□□□□ -2.46
CALD1-218ENST00000478075 AGKQ53H12 422 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 FAM120AOSQ5T036 256 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 UNQ9165/PRO28630Q6UXU0 137 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 ZNF620Q6ZNG0 422 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 RNF139Q8WU17 664 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 SLC5A11Q8WWX8 675 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 MRPL53Q96EL3 112 aaKnown RBP-0.31□□□□□ -2.46
CALD1-218ENST00000478075 SHANK2-AS3Q9BTD1 123 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 NTMT1Q9BV86 223 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 PARP11Q9NR21 331 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 NSMCE4AQ9NXX6 385 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 ERVK-18Q9QC07 812 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms