RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 NDUFAF6Q330K2 333 aa13.03□□□□□ -0.32
UBXN11-214ENST00000475591 NIPAL3Q6P499 406 aa13.03□□□□□ -0.32
UBXN11-214ENST00000475591 KLHL36Q8N4N3 616 aa13.03□□□□□ -0.32
UBXN11-214ENST00000475591 CLDN22Q8N7P3 220 aa13.03□□□□□ -0.32
UBXN11-214ENST00000475591 TOR1AIP2Q8NFQ8 470 aa13.03□□□□□ -0.32
UBXN11-214ENST00000475591 NEDD4LQ96PU5 975 aa13.03□□□□□ -0.32
UBXN11-214ENST00000475591 MAP3K3Q99759 626 aa13.03□□□□□ -0.32
UBXN11-214ENST00000475591 GDF15Q99988 308 aa13.03□□□□□ -0.32
UBXN11-214ENST00000475591 ORAI3Q9BRQ5 295 aa13.03□□□□□ -0.32
UBXN11-214ENST00000475591 CCDC32Q9BV29 185 aa13.03□□□□□ -0.32
UBXN11-214ENST00000475591 SRRQ9GZT4 340 aa13.03□□□□□ -0.32
UBXN11-214ENST00000475591 FOLH1BQ9HBA9 442 aa13.03□□□□□ -0.32
UBXN11-214ENST00000475591 WSB2Q9NYS7 404 aaPredicted RBP13.03□□□□□ -0.32
UBXN11-214ENST00000475591 FBXL4Q9UKA2 621 aa13.03□□□□□ -0.32
UBXN11-214ENST00000475591 C2orf92A0A1B0GVN3 265 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 OR5K4A6NMS3 321 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 C12orf71A8MTZ7 269 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 FOXS1O43638 330 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 HMGN1P05114 100 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 MRPL3P09001 348 aaKnown RBP13.02□□□□□ -0.32
UBXN11-214ENST00000475591 SLC35E2P0CK97 266 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 NOS3P29474 1203 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 SLC9A3P48764 834 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 CCR5P51681 352 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 AMZ1Q400G9 498 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 MANEAQ5SRI9 462 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 GATAD2AQ86YP4 633 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 CYB561A3Q8NBI2 242 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 OR52L1Q8NGH7 329 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 SPACA7Q96KW9 195 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 IFT27Q9BW83 186 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 YIPF2Q9BWQ6 316 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 ISYNA1Q9NPH2 558 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 KRCC1Q9NPI7 259 aaPredicted RBP13.02□□□□□ -0.32
UBXN11-214ENST00000475591 GPR27Q9NS67 375 aa13.02□□□□□ -0.32
UBXN11-214ENST00000475591 SIRT4Q9Y6E7 314 aaPredicted RBP13.02□□□□□ -0.32
UBXN11-214ENST00000475591 A0A1B0GWA3 101 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 J3QRE1 110 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 ATP6V1G1O75348 118 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 IL9P15248 144 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 SLC16A1P53985 500 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 ZCCHC12Q6PEW1 402 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 ZNF322Q6U7Q0 402 aaPredicted RBP13.02□□□□□ -0.33
UBXN11-214ENST00000475591 FAM131AQ6UXB0 335 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 NPSR1Q6W5P4 371 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 NRARPQ7Z6K4 114 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 MARCH9Q86YJ5 346 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 ARIH2OSQ8N7S6 290 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 PTP4A1Q93096 173 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 KISS1RQ969F8 398 aaPredicted RBP13.02□□□□□ -0.33
UBXN11-214ENST00000475591 WDFY2Q96P53 400 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 TIMP4Q99727 224 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 OR51V1Q9H2C8 321 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 SIGLEC7Q9Y286 467 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 TRAPPC4Q9Y296 219 aa13.02□□□□□ -0.33
UBXN11-214ENST00000475591 A0A1W2PPC4 97 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 A8MU76 341 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 GABRPO00591 440 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 HRO43593 1189 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 GYPBP06028 91 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 IL7P13232 177 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 BMP7P18075 431 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 MAOAP21397 527 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 MAOBP27338 520 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 PPM1FP49593 454 aaPredicted RBP13.01□□□□□ -0.33
UBXN11-214ENST00000475591 DEFA1P59665 94 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 DEFA3P59666 94 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 FOXK2Q01167 660 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 CD200R1LQ6Q8B3 271 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 PARGQ86W56 976 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 RIT1Q92963 219 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 ITPKCQ96DU7 683 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 KLHDC7BQ96G42 594 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 ZNF576Q9H609 170 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 DNAJB12Q9NXW2 375 aaKnown RBP13.01□□□□□ -0.33
UBXN11-214ENST00000475591 MED31Q9Y3C7 131 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 A0A0B4J2E0 115 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 A0A1B0GX12 115 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 A0A1W2PQ09 198 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 SLC35F4A4IF30 521 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 CASKO14936 926 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 PPP1R3DO95685 299 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 WNT1P04628 370 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 DRD5P21918 477 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 BMP8BP34820 402 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 ACAA2P42765 397 aaKnown RBP13.01□□□□□ -0.33
UBXN11-214ENST00000475591 PGDP52209 483 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 STX4Q12846 297 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 GARNL3Q5VVW2 1013 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 BMP8AQ7Z5Y6 402 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 RNF113BQ8IZP6 322 aaKnown RBP13.01□□□□□ -0.33
UBXN11-214ENST00000475591 LNX2Q8N448 690 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 SLC37A3Q8NCC5 494 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 ATP6V1C2Q8NEY4 427 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 DIRAS2Q96HU8 199 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 SIAEQ9HAT2 523 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 COMMD3Q9UBI1 195 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 TMEM184BQ9Y519 407 aaPredicted RBP13.01□□□□□ -0.33
UBXN11-214ENST00000475591 MTCH2Q9Y6C9 303 aa13.01□□□□□ -0.33
UBXN11-214ENST00000475591 TRDV1A0A1B0GX56 115 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms