RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 ZNF607Q96SK3 696 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 SPATA5L1Q9BVQ7 753 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 SPATA9Q9BWV2 254 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 BCL2L10Q9HD36 194 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 MED17Q9NVC6 651 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 ICAM5Q9UMF0 924 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 CAMK2AQ9UQM7 478 aa11.25□□□□□ -0.61
DDX56-209ENST00000473924 DNAJC13O75165 2243 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 OR2M5A3KFT3 312 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 SHISA8B8ZZ34 492 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 H3BML4 177 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 LINC01387J3KSC0 135 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 WDR1O75083 606 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 THBS1P07996 1170 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 GABRA1P14867 456 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 ETS2P15036 469 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 PGCP20142 388 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 POU3F2P20265 443 aaPredicted RBP11.24□□□□□ -0.61
DDX56-209ENST00000473924 RPS4Y1P22090 263 aaKnown RBP11.24□□□□□ -0.61
DDX56-209ENST00000473924 AQP1P29972 269 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 RYKP34925 604 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 CPA2P48052 419 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 STARP49675 285 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 PER3P56645 1201 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 SRYQ05066 204 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 ADRM1Q16186 407 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 ZSWIM7Q19AV6 140 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 PLPPR5Q32ZL2 321 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 EMC4Q5J8M3 183 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 ZNF311Q5JNZ3 666 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 MRPL2Q5T653 305 aaKnown RBP11.24□□□□□ -0.61
DDX56-209ENST00000473924 ZNF836Q6ZNA1 936 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 PTOV1Q86YD1 416 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 SLC30A8Q8IWU4 369 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 FAM26EQ8N5C1 309 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 ZNF563Q8TA94 476 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 CNOT9Q92600 299 aaKnown RBP11.24□□□□□ -0.61
DDX56-209ENST00000473924 RELTQ969Z4 430 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 HOPXQ9BPY8 73 aaPredicted RBP11.24□□□□□ -0.61
DDX56-209ENST00000473924 EXOSC3Q9NQT5 275 aaKnown RBP11.24□□□□□ -0.61
DDX56-209ENST00000473924 STOML1Q9UBI4 398 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 ZNF443Q9Y2A4 671 aaPredicted RBP11.24□□□□□ -0.61
DDX56-209ENST00000473924 ZNF337Q9Y3M9 751 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 GTF3C1Q12789 2109 aa11.24□□□□□ -0.61
DDX56-209ENST00000473924 PRORSD1PA6NEY8 169 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 E9PLN8 166 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 H0Y3Z8 333 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 SEMA7AO75326 666 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 SERPINB7O75635 380 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 LINGO3P0C6S8 592 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 PABPC4LP0CB38 370 aaKnown RBP11.23□□□□□ -0.61
DDX56-209ENST00000473924 PEPDP12955 493 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 UQCRBP14927 111 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 ZNF17P17021 662 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 ME2P23368 584 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 ACVR2AP27037 513 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 PCGF2P35227 344 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 EIF1P41567 113 aaKnown RBP11.23□□□□□ -0.61
DDX56-209ENST00000473924 SLC6A8P48029 635 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 B3GALT5-AS1P59052 145 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 MXRA7P84157 204 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 FOXF1Q12946 379 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 QPRTQ15274 297 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 SF3B4Q15427 424 aaKnown RBP eCLIP11.23□□□□□ -0.614e-19■■■■■ 46.7
DDX56-209ENST00000473924 TOMM34Q15785 309 aaPredicted RBP11.23□□□□□ -0.61
DDX56-209ENST00000473924 VMACQ2NL98 169 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 DCST1Q5T197 706 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 INTS11Q5TA45 600 aaKnown RBP11.23□□□□□ -0.61
DDX56-209ENST00000473924 RNF220Q5VTB9 566 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 MTFR2Q6P444 385 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 HACD2Q6Y1H2 254 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 NET1Q7Z628 596 aaPredicted RBP11.23□□□□□ -0.61
DDX56-209ENST00000473924 ZZZ3Q8IYH5 903 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 ZNF440Q8IYI8 595 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 ULK2Q8IYT8 1036 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 UBQLNLQ8IYU4 475 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 FAM71CQ8NEG0 241 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 GPR119Q8TDV5 335 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 TMEM234Q8WY98 164 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 SMPDL3BQ92485 455 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 ARSGQ96EG1 525 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 WDYHV1Q96HA8 205 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 RNF145Q96MT1 663 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 KLHDC3Q9BQ90 382 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 VKORC1Q9BQB6 163 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 PRDM14Q9GZV8 571 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 RLIMQ9NVW2 624 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 DNAJB12Q9NXW2 375 aaKnown RBP11.23□□□□□ -0.61
DDX56-209ENST00000473924 TAGLN3Q9UI15 199 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 ERRFI1Q9UJM3 462 aaPredicted RBP11.23□□□□□ -0.61
DDX56-209ENST00000473924 AP3M1Q9Y2T2 418 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 MEMO1Q9Y316 297 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 GPC6Q9Y625 555 aaPredicted RBP11.23□□□□□ -0.61
DDX56-209ENST00000473924 PCNX3Q9H6A9 2034 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 MYO18BQ8IUG5 2567 aa11.23□□□□□ -0.61
DDX56-209ENST00000473924 UBR5O95071 2799 aaPredicted RBP11.22□□□□□ -0.61
DDX56-209ENST00000473924 C7orf72A4D263 438 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 CDHR4A6H8M9 788 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 CCT8L1PA6NM43 557 aa11.22□□□□□ -0.61
DDX56-209ENST00000473924 AHRRA9YTQ3 701 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms