RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 GPRIN3Q6ZVF9 776 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 BHLHA15Q7RTS1 189 aaPredicted RBP8.23□□□□□ -1.09
VCL-204ENST00000472585 TRABD2AQ86V40 505 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 ZNF525Q8N782 197 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 C3orf56Q8N813 242 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 BANPQ8N9N5 519 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 GPR151Q8TDV0 419 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 ACTRT2Q8TDY3 377 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 PROX1Q92786 737 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 CIDECQ96AQ7 238 aaPredicted RBP8.23□□□□□ -1.09
VCL-204ENST00000472585 OTUB1Q96FW1 271 aaPredicted RBP8.23□□□□□ -1.09
VCL-204ENST00000472585 KLHL15Q96M94 604 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 EQTNQ9NQ60 294 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 GIMAP4Q9NUV9 329 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 DDX18Q9NVP1 670 aaKnown RBP8.23□□□□□ -1.09
VCL-204ENST00000472585 SENP1Q9P0U3 644 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 KLHL13Q9P2N7 655 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 STOML1Q9UBI4 398 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 PYCARDQ9ULZ3 195 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 UTP11Q9Y3A2 253 aaKnown RBP8.23□□□□□ -1.09
VCL-204ENST00000472585 CCL27Q9Y4X3 112 aa8.23□□□□□ -1.09
VCL-204ENST00000472585 POLR3HQ9Y535 204 aaPredicted RBP8.23□□□□□ -1.09
VCL-204ENST00000472585 GOLGA8QA0A0J9YX86 632 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 GOLGA8OA6NCC3 632 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 NPIPB8E9PQR5 432 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 GOLGA8NF8WBI6 632 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 GOLGA8RI6L899 631 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 ZNF195O14628 629 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 LY6HO94772 140 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 PRKD3O94806 890 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 KCNK2O95069 426 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 PGM3O95394 542 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 YES1P07947 543 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 NGFRP08138 427 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 ITGA2P17301 1181 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 IMPDH1P20839 514 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 IGHV1-2P23083 117 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 GCAP28676 217 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 CLK3P49761 638 aaKnown RBP8.22□□□□□ -1.09
VCL-204ENST00000472585 FOXG1P55316 489 aaPredicted RBP8.22□□□□□ -1.09
VCL-204ENST00000472585 ZNF117Q03924 483 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 FOXF1Q12946 379 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 SLC29A2Q14542 456 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 KIAA0040Q15053 153 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 DUSP5Q16690 384 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 TSNAXIP1Q2TAA8 658 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 TMEM176BQ3YBM2 270 aaPredicted RBP8.22□□□□□ -1.09
VCL-204ENST00000472585 FAM174BQ3ZCQ3 159 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 PDLIM3Q53GG5 364 aaPredicted RBP8.22□□□□□ -1.09
VCL-204ENST00000472585 TMEM201Q5SNT2 666 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 TEX35Q5T0J7 233 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 CCNJQ5T5M9 372 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 Q6ZSR9 355 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 FCRLAQ7L513 359 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.22□□□□□ -1.09
VCL-204ENST00000472585 CDC26Q8NHZ8 85 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 FBXO27Q8NI29 283 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 KISS1RQ969F8 398 aaPredicted RBP8.22□□□□□ -1.09
VCL-204ENST00000472585 ZBTB8AQ96BR9 441 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 C1orf159Q96HA4 380 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 PAFAH2Q99487 392 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 PSD2Q9BQI7 771 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 CACNG6Q9BXT2 260 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 GSTO2Q9H4Y5 243 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 L2HGDHQ9H9P8 463 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 EML4Q9HC35 981 aaKnown RBP8.22□□□□□ -1.09
VCL-204ENST00000472585 MYNNQ9NPC7 610 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 PAQR5Q9NXK6 330 aaPredicted RBP8.22□□□□□ -1.09
VCL-204ENST00000472585 NTMQ9P121 344 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 GRID1Q9ULK0 1009 aa8.22□□□□□ -1.09
VCL-204ENST00000472585 NPIPA5A0A0B4J1W7 369 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 A0A1W2PNR3 127 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 A0A1W2PR80 420 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 NPIPA7E9PJI5 369 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 ABCD4O14678 606 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 KCNH1O95259 989 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 CSF3P09919 207 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 NPIPA8P0DM63 369 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 PRPS2P11908 318 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 CREB1P16220 341 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 EFNA1P20827 205 aaPredicted RBP8.21□□□□□ -1.1
VCL-204ENST00000472585 HMOX2P30519 316 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 TTKP33981 857 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 SRP14P37108 136 aaKnown RBP8.21□□□□□ -1.1
VCL-204ENST00000472585 OR3A2P47893 321 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 PRKAG1P54619 331 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 PRKAA2P54646 552 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 CDH11P55287 796 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 ZNF763Q0D2J5 394 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 PPA1Q15181 289 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 ZNHIT3Q15649 155 aaPredicted RBP8.21□□□□□ -1.1
VCL-204ENST00000472585 NDUFAF6Q330K2 333 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 SPDYAQ5MJ70 313 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.21□□□□□ -1.1
VCL-204ENST00000472585 Q6ZT83 130 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 C10orf105Q8TEF2 133 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 ZNF300Q96RE9 604 aaPredicted RBP8.21□□□□□ -1.1
VCL-204ENST00000472585 POTEKPQ9BYX7 375 aa8.21□□□□□ -1.1
VCL-204ENST00000472585 CDC42EP4Q9H3Q1 356 aaKnown RBP8.21□□□□□ -1.1
VCL-204ENST00000472585 ANKZF1Q9H8Y5 726 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms