RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 M1APQ8TC57 530 aa6.11□□□□□ -1.43
VAMP3-202ENST00000470357 FAM110BQ8TC76 370 aa6.11□□□□□ -1.43
VAMP3-202ENST00000470357 SLC22A8Q8TCC7 542 aa6.11□□□□□ -1.43
VAMP3-202ENST00000470357 SLC35B4Q969S0 331 aa6.11□□□□□ -1.43
VAMP3-202ENST00000470357 TAMM41Q96BW9 452 aa6.11□□□□□ -1.43
VAMP3-202ENST00000470357 SDCCAG3Q96C92 435 aa6.11□□□□□ -1.43
VAMP3-202ENST00000470357 RMND5BQ96G75 393 aaPredicted RBP6.11□□□□□ -1.43
VAMP3-202ENST00000470357 ZNF354BQ96LW1 612 aa6.11□□□□□ -1.43
VAMP3-202ENST00000470357 NUDT9Q9BW91 350 aa6.11□□□□□ -1.43
VAMP3-202ENST00000470357 ITPAQ9BY32 194 aa6.11□□□□□ -1.43
VAMP3-202ENST00000470357 POLR2J2Q9GZM3 115 aaKnown RBP6.11□□□□□ -1.43
VAMP3-202ENST00000470357 WWTR1Q9GZV5 400 aa6.11□□□□□ -1.43
VAMP3-202ENST00000470357 POLR2J3Q9H1A7 115 aaKnown RBP6.11□□□□□ -1.43
VAMP3-202ENST00000470357 UBQLN4Q9NRR5 601 aa6.11□□□□□ -1.43
VAMP3-202ENST00000470357 AGPAT4Q9NRZ5 378 aa6.11□□□□□ -1.43
VAMP3-202ENST00000470357 FOXJ2Q9P0K8 574 aa6.11□□□□□ -1.43
VAMP3-202ENST00000470357 RNF114Q9Y508 228 aa6.11□□□□□ -1.43
VAMP3-202ENST00000470357 HS3ST3B1Q9Y662 390 aa6.11□□□□□ -1.43
VAMP3-202ENST00000470357 IGHV1-45A0A0A0MS14 117 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 TRBV11-1A0A0K0K1C0 115 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 H3BNH8 94 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 HRKO00198 91 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 SCDO00767 359 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 KLK10O43240 276 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 PEX1O43933 1283 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 TPST1O60507 370 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 E2F6O75461 281 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 TIPRLO75663 272 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 SEC24DO94855 1032 aaPredicted RBP6.1□□□□□ -1.43
VAMP3-202ENST00000470357 IL33O95760 270 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 HPP00738 406 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 CST1P01037 141 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 CLPSP04118 112 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 SEMG1P04279 462 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 FESP07332 822 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 NGFRP08138 427 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 LIPCP11150 499 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 COX6A1P12074 109 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 RHCEP18577 417 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 CD247P20963 164 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 RPS4Y1P22090 263 aaKnown RBP6.1□□□□□ -1.43
VAMP3-202ENST00000470357 IL12BP29460 328 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 DNAJA1P31689 397 aaKnown RBP6.1□□□□□ -1.43
VAMP3-202ENST00000470357 PTDSS1P48651 473 aaKnown RBP6.1□□□□□ -1.43
VAMP3-202ENST00000470357 CLK3P49761 638 aaKnown RBP6.1□□□□□ -1.43
VAMP3-202ENST00000470357 EFNA3P52797 238 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 PNLIPRP2P54317 469 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 ATP12AP54707 1039 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 SESN3P58005 492 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 KCNJ10P78508 379 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 CHRNEQ04844 493 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 EGR3Q06889 387 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 PCOLCEQ15113 449 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 TRIP10Q15642 601 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 GPR68Q15743 365 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 MAPK11Q15759 364 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 ZNF141Q15928 474 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 BTBD16Q32M84 506 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 LINC00303Q3SY05 128 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 OR2T5Q6IEZ7 315 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 TYW3Q6IPR3 259 aaKnown RBP6.1□□□□□ -1.43
VAMP3-202ENST00000470357 JMJD6Q6NYC1 403 aaPredicted RBP6.1□□□□□ -1.43
VAMP3-202ENST00000470357 RANBP3LQ86VV4 465 aaPredicted RBP6.1□□□□□ -1.43
VAMP3-202ENST00000470357 JAZF1Q86VZ6 243 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 HIPK1Q86Z02 1210 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 SLC34A3Q8N130 599 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 PACRGLQ8N7B6 248 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 BCORP1Q8N888 145 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 APCDD1LQ8NCL9 501 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 SIMC1Q8NDZ2 872 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 TOR1AIP2Q8NFQ8 470 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 OR2T29Q8NH02 315 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 KCNE4Q8WWG9 221 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 PIK3R3Q92569 461 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 ADIPOR1Q96A54 375 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 EME1Q96AY2 570 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 SLCO4A1Q96BD0 722 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 NRBF2Q96F24 287 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 OTUB1Q96FW1 271 aaPredicted RBP6.1□□□□□ -1.43
VAMP3-202ENST00000470357 ALPK1Q96QP1 1244 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 GAL3ST4Q96RP7 486 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 WDR77Q9BQA1 342 aaPredicted RBP6.1□□□□□ -1.43
VAMP3-202ENST00000470357 C9orf16Q9BUW7 83 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 DEFB126Q9BYW3 111 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 DPH1Q9BZG8 443 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 KLHL4Q9C0H6 718 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 NXF5Q9H1B4 397 aaKnown RBP6.1□□□□□ -1.43
VAMP3-202ENST00000470357 REEP1Q9H902 201 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 AKIRIN1Q9H9L7 192 aaPredicted RBP6.1□□□□□ -1.43
VAMP3-202ENST00000470357 GPN2Q9H9Y4 310 aaPredicted RBP6.1□□□□□ -1.43
VAMP3-202ENST00000470357 MMP25Q9NPA2 562 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.1□□□□□ -1.43
VAMP3-202ENST00000470357 C19orf73Q9NVV2 129 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 RIMS3Q9UJD0 308 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 CNOT11Q9UKZ1 510 aaKnown RBP6.1□□□□□ -1.43
VAMP3-202ENST00000470357 MKLN1Q9UL63 735 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 ZNF443Q9Y2A4 671 aaPredicted RBP6.1□□□□□ -1.43
VAMP3-202ENST00000470357 SLC35A3Q9Y2D2 325 aa6.1□□□□□ -1.43
VAMP3-202ENST00000470357 KCNE3Q9Y6H6 103 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms