RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-205	ENST00000470197	CHST11	Q9NPF2	352 aa		4.13	□□□□□ -1.75
GCFC2-205	ENST00000470197	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
GCFC2-205	ENST00000470197	RHBDD3	Q9Y3P4	386 aa		4.13	□□□□□ -1.75
GCFC2-205	ENST00000470197	CSDC2	Q9Y534	153 aa	Known RBP	4.13	□□□□□ -1.75
GCFC2-205	ENST00000470197	HES2	Q9Y543	173 aa		4.13	□□□□□ -1.75
GCFC2-205	ENST00000470197	LOC105371242	A0A075B767	164 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	HNRNPCL2	B2RXH8	293 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	MSH4	O15457	936 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	CCL16	O15467	120 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	CTNNA2	P26232	953 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	RDX	P35241	583 aa	Known RBP	4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	HACD2	Q6Y1H2	254 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	NANOGNB	Q7Z5D8	188 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	PIGZ	Q86VD9	579 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	KIRREL3	Q8IZU9	778 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	NANOGP1	Q8N7R0	232 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	MLKL	Q8NB16	471 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	SUMF1	Q8NBK3	374 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	OR51G2	Q8NGK0	314 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	ING5	Q8WYH8	240 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	B3GALT6	Q96L58	329 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	TGM7	Q96PF1	710 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	ZBP1	Q9H171	429 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	COG4	Q9H9E3	785 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	SGK2	Q9HBY8	427 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	ELOVL5	Q9NYP7	299 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	MBD2	Q9UBB5	411 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	ZMAT5	Q9UDW3	170 aa	Known RBP	4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	FZR1	Q9UM11	496 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	CHD7	Q9P2D1	2997 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	FRMPD4	Q14CM0	1322 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197		A0A0U1RQS6	177 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	CHEK1	O14757	476 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	TRAPPC3	O43617	180 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	SLITRK3	O94933	977 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	OR3A2	P47893	321 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	CLDN8	P56748	225 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	DRP2	Q13474	957 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	CALCRL	Q16602	461 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	EXOC3L2	Q2M3D2	409 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	SLC25A47	Q6Q0C1	308 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	ZNF730	Q6ZMV8	503 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	KCTD8	Q6ZWB6	473 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	BLID	Q8IZY5	108 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	CNIH3	Q8TBE1	160 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	CPB2	Q96IY4	423 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	SLC38A2	Q96QD8	506 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	OR1F2P	Q96R84	312 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	CLUH	O75153	1309 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	LRRC37A2	A6NM11	1700 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	LOC390937	A0A1W2PQ73	354 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	CASK	O14936	926 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	BUD23	O43709	281 aa	Known RBP	4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	TDP2	O95551	362 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	F10	P00742	488 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	NPPA	P01160	153 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	ZNF74	Q16587	644 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	PARP6	Q2NL67	630 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	TRNP1	Q6NT89	227 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	ZNF852	Q6ZMS4	543 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	CENPU	Q71F23	418 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	PPFIBP2	Q8ND30	876 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	KCNG3	Q8TAE7	436 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	RBM4	Q9BWF3	364 aa	Known RBP	4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	PRDM4	Q9UKN5	801 aa		4.12	□□□□□ -1.75
GCFC2-205	ENST00000470197	CHD9	Q3L8U1	2897 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	F5	P12259	2224 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	CNTNAP2	Q9UHC6	1331 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	EPG5	Q9HCE0	2579 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197		A0A1W2PPI3	338 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	TTC26	A0AVF1	554 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	HHLA1	C9JL84	531 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	CASC3	O15234	703 aa	Known RBP	4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	SLC2A3	P11169	496 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	FGF3	P11487	239 aa	Predicted RBP	4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	FEN1	P39748	380 aa	Known RBP	4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	MAGEA1	P43355	309 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	CD151	P48509	253 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	FHIT	P49789	147 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	SEC61A1	P61619	476 aa	Known RBP	4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	LAMTOR4	Q0VGL1	99 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	ELAVL2	Q12926	359 aa	Known RBP	4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	KIR2DS3	Q14952	304 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	RBBP5	Q15291	538 aa	Known RBP	4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	PSMD5	Q16401	504 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	AGAP7P	Q5VUJ5	663 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	OR1B1	Q8NGR6	318 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	UPRT	Q96BW1	309 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	IFT74	Q96LB3	600 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	AGAP4	Q96P64	663 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	TMEM175	Q9BSA9	504 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	LRRN3	Q9H3W5	708 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	GCNT4	Q9P109	453 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	ICAM5	Q9UMF0	924 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	FKBP7	Q9Y680	259 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	ZNF724	A8MTY0	619 aa		4.11	□□□□□ -1.75
GCFC2-205	ENST00000470197	DEXI	O95424	95 aa		4.11	□□□□□ -1.75

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