RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 RASA2Q15283 850 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 ARL13AQ5H913 290 aaPredicted RBP16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 TEX35Q5T0J7 233 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 ZNF544Q6NX49 715 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 B3GLCTQ6Y288 498 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 MISPQ8IVT2 679 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 FBXO27Q8NI29 283 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 ZFP90Q8TF47 636 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 AMDHD1Q96NU7 426 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 KLHDC3Q9BQ90 382 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 INPP5KQ9BT40 448 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 TRMOQ9BU70 441 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 C1QTNF6Q9BXI9 259 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 MYNNQ9NPC7 610 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 GOLGA8QA0A0J9YX86 632 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 GOLGA8OA6NCC3 632 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 GOLGA8NF8WBI6 632 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 GOLGA8RI6L899 631 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 PGM3O95394 542 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 NGFRP08138 427 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 LINGO3P0C6S8 592 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 ELK4P28324 431 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 HSD17B3P37058 310 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 GSTM5P46439 218 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 CLCQ05315 142 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 ZNF763Q0D2J5 394 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 HSPB3Q12988 150 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 TSNAXIP1Q2TAA8 658 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 ZNF433Q8N7K0 673 aaPredicted RBP16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 PHOSPHO1Q8TCT1 267 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 PSD2Q9BQI7 771 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 BCO1Q9HAY6 547 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 UBQLN4Q9NRR5 601 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 GRHL1Q9NZI5 618 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 SAR1BQ9Y6B6 198 aa16.7■□□□□ 0.26
NCKIPSD-209ENST00000470006 IGHV4-61A0A0C4DH41 118 aa16.69■□□□□ 0.26
NCKIPSD-209ENST00000470006 A0A1W2PNR3 127 aa16.69■□□□□ 0.26
NCKIPSD-209ENST00000470006 FAM187AA6NFU0 413 aa16.69■□□□□ 0.26
NCKIPSD-209ENST00000470006 NDUFS8O00217 210 aa16.69■□□□□ 0.26
NCKIPSD-209ENST00000470006 RGS14O43566 566 aa16.69■□□□□ 0.26
NCKIPSD-209ENST00000470006 EFNA2O43921 213 aa16.69■□□□□ 0.26
NCKIPSD-209ENST00000470006 SUPT7LO94864 414 aa16.69■□□□□ 0.26
NCKIPSD-209ENST00000470006 IGHV3-9P01782 118 aa16.69■□□□□ 0.26
NCKIPSD-209ENST00000470006 EDNRAP25101 427 aa16.69■□□□□ 0.26
NCKIPSD-209ENST00000470006 GPRIN3Q6ZVF9 776 aa16.69■□□□□ 0.26
NCKIPSD-209ENST00000470006 GALNT5Q7Z7M9 940 aa16.69■□□□□ 0.26
NCKIPSD-209ENST00000470006 OR6Y1Q8NGX8 325 aa16.69■□□□□ 0.26
NCKIPSD-209ENST00000470006 FOXN4Q96NZ1 517 aa16.69■□□□□ 0.26
NCKIPSD-209ENST00000470006 ZNF300Q96RE9 604 aaPredicted RBP16.69■□□□□ 0.26
NCKIPSD-209ENST00000470006 MRPL57Q9BQC6 102 aaKnown RBP16.69■□□□□ 0.26
NCKIPSD-209ENST00000470006 OCEL1Q9H607 264 aa16.69■□□□□ 0.26
NCKIPSD-209ENST00000470006 A8MT66 165 aa16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 VWC2LB2RUY7 222 aa16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 NKX2-2O95096 273 aa16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 COX5AP20674 150 aa16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 APOBEC3AP31941 199 aaPredicted RBP16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 HTR6P50406 440 aa16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 RNF144AP50876 292 aaPredicted RBP16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 RAC3P60763 192 aa16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 CD226Q15762 336 aa16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 GALNT18Q6P9A2 607 aa16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 ZNF551Q7Z340 670 aaPredicted RBP16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 ZAR1Q86SH2 424 aa16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 CDRT4Q8N9R6 151 aa16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 CEP70Q8NHQ1 597 aa16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 FBXO17Q96EF6 278 aa16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 CHMP6Q96FZ7 201 aa16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 MRPL46Q9H2W6 279 aaKnown RBP16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 COQ10BQ9H8M1 238 aa16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 FKRPQ9H9S5 495 aa16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 NTMQ9P121 344 aa16.68■□□□□ 0.26
NCKIPSD-209ENST00000470006 KIF2AO00139 706 aaPredicted RBP16.67■□□□□ 0.26
NCKIPSD-209ENST00000470006 KCNK2O95069 426 aa16.67■□□□□ 0.26
NCKIPSD-209ENST00000470006 CAV1Q03135 178 aa16.67■□□□□ 0.26
NCKIPSD-209ENST00000470006 ZNF117Q03924 483 aa16.67■□□□□ 0.26
NCKIPSD-209ENST00000470006 FAM71E1Q6IPT2 247 aa16.67■□□□□ 0.26
NCKIPSD-209ENST00000470006 C3orf56Q8N813 242 aa16.67■□□□□ 0.26
NCKIPSD-209ENST00000470006 COX18Q8N8Q8 333 aa16.67■□□□□ 0.26
NCKIPSD-209ENST00000470006 NUP43Q8NFH3 380 aa16.67■□□□□ 0.26
NCKIPSD-209ENST00000470006 FBXO25Q8TCJ0 367 aa16.67■□□□□ 0.26
NCKIPSD-209ENST00000470006 TAS2R7Q9NYW3 318 aa16.67■□□□□ 0.26
NCKIPSD-209ENST00000470006 TMEFF2Q9UIK5 374 aaPredicted RBP16.67■□□□□ 0.26
NCKIPSD-209ENST00000470006 ING1Q9UK53 422 aaPredicted RBP16.67■□□□□ 0.26
NCKIPSD-209ENST00000470006 TRAF6Q9Y4K3 522 aa16.67■□□□□ 0.26
NCKIPSD-209ENST00000470006 TIMM22Q9Y584 194 aa16.67■□□□□ 0.26
NCKIPSD-209ENST00000470006 SLC25A15Q9Y619 301 aa16.67■□□□□ 0.26
NCKIPSD-209ENST00000470006 GPC6Q9Y625 555 aaPredicted RBP16.67■□□□□ 0.26
NCKIPSD-209ENST00000470006 MGAM2Q2M2H8 2515 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 LOC390937A0A1W2PQ73 354 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 CCDC151A5D8V7 595 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 GTPBP1O00178 669 aaKnown RBP16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 RAD51CO43502 376 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 SERPINB4P48594 390 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 ACTG1P63261 375 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 MLC1Q15049 377 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 TRADDQ15628 312 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 IMPG1Q17R60 797 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 FAM174BQ3ZCQ3 159 aa16.66■□□□□ 0.26
NCKIPSD-209ENST00000470006 CCNJQ5T5M9 372 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms