RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 WARS2Q9UGM6 360 aaKnown RBP8.61□□□□□ -1.03
SMC1A-205ENST00000469129 NTNG1Q9Y2I2 539 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 RPL36Q9Y3U8 105 aaKnown RBP8.61□□□□□ -1.03
SMC1A-205ENST00000469129 USP34Q70CQ2 3546 aa8.61□□□□□ -1.03
SMC1A-205ENST00000469129 MPDZO75970 2070 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 A0A1B0GWA3 101 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 VSTM2BA6NLU5 285 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 B4E171 279 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 H3BSA7 217 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 TMX2-CTNND1H3BSU7 103 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 KLF4O43474 513 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 AHCYL1O43865 530 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 PIP5K1CO60331 668 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 TRMUO75648 421 aaKnown RBP8.6□□□□□ -1.03
SMC1A-205ENST00000469129 RCBTB2O95199 551 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 LYPD3O95274 346 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 UTS2O95399 124 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 FADS2O95864 444 aaKnown RBP8.6□□□□□ -1.03
SMC1A-205ENST00000469129 THY1P04216 161 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 HMGN1P05114 100 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 KLK3P07288 261 aaPredicted RBP8.6□□□□□ -1.03
SMC1A-205ENST00000469129 CD63P08962 238 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 IFI30P13284 250 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 TBXA2RP21731 343 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 PCMT1P22061 227 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 TSPAN7P41732 249 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 GPR4P46093 362 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 GIPRP48546 466 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 ST13P50502 369 aaKnown RBP8.6□□□□□ -1.03
SMC1A-205ENST00000469129 PNLIPRP2P54317 469 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 CTBP2P56545 445 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 RAB15P59190 212 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 MC2RQ01718 297 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 PLAURQ03405 335 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 EMX1Q04741 257 aaPredicted RBP8.6□□□□□ -1.03
SMC1A-205ENST00000469129 ZFP36L1Q07352 338 aaKnown RBP8.6□□□□□ -1.03
SMC1A-205ENST00000469129 EFR3AQ14156 821 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 SMN1Q16637 294 aaKnown RBP8.6□□□□□ -1.03
SMC1A-205ENST00000469129 PGGHGQ32M88 737 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 KLHL26Q53HC5 615 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 ALG10BQ5I7T1 473 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 UBE2UQ5VVX9 321 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 TMEM236Q5W0B7 351 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 GTF2IRD2BQ6EKJ0 949 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 CCDC81Q6ZN84 652 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 DBX2Q6ZNG2 339 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 LANCL3Q6ZV70 420 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 PRICKLE2Q7Z3G6 844 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 ANKRD37Q7Z713 158 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 MRGPREQ86SM8 312 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 GTF2IRD2Q86UP8 949 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 KIF18BQ86Y91 864 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 ERI1Q8IV48 349 aaKnown RBP8.6□□□□□ -1.03
SMC1A-205ENST00000469129 C9orf40Q8IXQ3 194 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 FAM26EQ8N5C1 309 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 TMCO5AQ8N6Q1 288 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 B3GNT7Q8NFL0 401 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 OR2T33Q8NG76 320 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 TMEM163Q8TC26 289 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 BRIX1Q8TDN6 353 aaKnown RBP8.6□□□□□ -1.03
SMC1A-205ENST00000469129 GRHL3Q8TE85 626 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 RHBDD1Q8TEB9 315 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 FAR1Q8WVX9 515 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 TP53INP1Q96A56 240 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 EFHD2Q96C19 240 aaPredicted RBP8.6□□□□□ -1.03
SMC1A-205ENST00000469129 NMD3Q96D46 503 aaKnown RBP8.6□□□□□ -1.03
SMC1A-205ENST00000469129 CRELD1Q96HD1 420 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 LPAR4Q99677 370 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 DOK1Q99704 481 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 CRB3Q9BUF7 120 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 PRR14Q9BWN1 585 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 SEMA4CQ9C0C4 833 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 STRADBQ9C0K7 418 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 NDEL1Q9GZM8 345 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 LHPPQ9H008 270 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 ACOT13Q9NPJ3 140 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 FBXO8Q9NRD0 319 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 SLC22A11Q9NSA0 550 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 RXFP3Q9NSD7 469 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 IL20Q9NYY1 176 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 ZNF223Q9UK11 482 aaPredicted RBP8.6□□□□□ -1.03
SMC1A-205ENST00000469129 PPIEQ9UNP9 301 aaKnown RBP8.6□□□□□ -1.03
SMC1A-205ENST00000469129 BAIAP2Q9UQB8 552 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 CPAMD8Q8IZJ3 1885 aa8.6□□□□□ -1.03
SMC1A-205ENST00000469129 EFCAB9A8MZ26 197 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 GTPBP1O00178 669 aaKnown RBP8.59□□□□□ -1.03
SMC1A-205ENST00000469129 ZNF264O43296 627 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 EIF4E2O60573 245 aaKnown RBP8.59□□□□□ -1.03
SMC1A-205ENST00000469129 HCN1O60741 890 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 CNOT3O75175 753 aaKnown RBP8.59□□□□□ -1.03
SMC1A-205ENST00000469129 REM1O75628 298 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 PPM1BO75688 479 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 TIAF1O95411 115 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 PNMTP11086 282 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 BMP7P18075 431 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 PSMB9P28065 219 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 SLC5A2P31639 672 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 GRK5P34947 590 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 ACAA2P42765 397 aaKnown RBP8.59□□□□□ -1.03
SMC1A-205ENST00000469129 SLC9A3P48764 834 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms