RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 PDK4Q16654 411 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 RABGAP1LQ5R372 815 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 PVRIGQ6DKI7 326 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 PYHIN1Q6K0P9 492 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 BLOC1S2Q6QNY1 142 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 CDC20BQ86Y33 519 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 HSCBQ8IWL3 235 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 LINC01561Q8N1V8 128 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 PNPT1Q8TCS8 783 aaKnown RBP3.85□□□□□ -1.79
LSM5-209ENST00000468872 RAET1EQ8TD07 263 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 GTSF1Q8WW33 167 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 SPRYD4Q8WW59 207 aaPredicted RBP3.85□□□□□ -1.79
LSM5-209ENST00000468872 SDSLQ96GA7 329 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 TXN2Q99757 166 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 ALG12Q9BV10 488 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 RSPH14Q9UHP6 348 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 CRLS1Q9UJA2 301 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 USP16Q9Y5T5 823 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 SPACA6W5XKT8 324 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 PLCH2O75038 1416 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 FAM135AQ9P2D6 1515 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 TRANK1O15050 2925 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 TNS1Q9HBL0 1735 aaKnown RBP3.84□□□□□ -1.79
LSM5-209ENST00000468872 CASZ1Q86V15 1759 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 IGHV3-35A0A0C4DH35 117 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 GSAPA4D1B5 854 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 LATO43561 262 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 BCAS1O75363 584 aaPredicted RBP3.84□□□□□ -1.79
LSM5-209ENST00000468872 NOL4O94818 638 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 F10P00742 488 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 HBQ1P09105 142 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 H2AFZP0C0S5 128 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 PDHBP11177 359 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 PGAM2P15259 253 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 RPA2P15927 270 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 AZU1P20160 251 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 TPSB2P20231 275 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 CALRP27797 417 aaKnown RBP3.84□□□□□ -1.79
LSM5-209ENST00000468872 GNPDA1P46926 289 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 ARFIP1P53367 373 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 RND3P61587 244 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 EWSR1Q01844 656 aaKnown RBP eCLIP3.84□□□□□ -1.79
LSM5-209ENST00000468872 BDH1Q02338 343 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 SELPLGQ14242 412 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 TPSAB1Q15661 275 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 TEX44Q53QW1 395 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 OR8G2PQ6IF36 304 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 CGB2Q6NT52 195 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 ACSM5Q6NUN0 579 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 UFSP1Q6NVU6 142 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 HPS6Q86YV9 775 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 C9orf40Q8IXQ3 194 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 MCOLN2Q8IZK6 566 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 CSNK1A1LQ8N752 337 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 OR2T33Q8NG76 320 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 OR9A4Q8NGU2 314 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 OR2T3Q8NH03 318 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 ARNTL2Q8WYA1 636 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 RPL3LQ92901 407 aaKnown RBP3.84□□□□□ -1.79
LSM5-209ENST00000468872 MYLPFQ96A32 169 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 TMEM80Q96HE8 168 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 TTC25Q96NG3 672 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 CCT8L2Q96SF2 557 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 TEX13BQ9BXU2 312 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 ELOVL4Q9GZR5 314 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 MIEF1Q9NQG6 463 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 SNX6Q9UNH7 406 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 L3MBTL1Q9Y468 752 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 MSH6P52701 1360 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 MAP3K5Q99683 1374 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 SETD5Q9C0A6 1442 aa3.84□□□□□ -1.79
LSM5-209ENST00000468872 TIAM1Q13009 1591 aa3.84□□□□□ -1.8
LSM5-209ENST00000468872 RGPD1P0DJD0 1748 aa3.84□□□□□ -1.8
LSM5-209ENST00000468872 GON4LQ3T8J9 2241 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 H0YCG3 227 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 DUSP14O95147 198 aaKnown RBP3.83□□□□□ -1.8
LSM5-209ENST00000468872 CD55P08174 381 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 PRG2P13727 222 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 TBXA2RP21731 343 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 UQCRC2P22695 453 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 IGHV1-2P23083 117 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 ATP5A1P25705 553 aaKnown RBP3.83□□□□□ -1.8
LSM5-209ENST00000468872 OTX2P32243 289 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 RGS4P49798 205 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 PLA2G16P53816 162 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 TGIF1Q15583 401 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 TPD52L1Q16890 204 aaPredicted RBP3.83□□□□□ -1.8
LSM5-209ENST00000468872 QRICH1Q2TAL8 776 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 ATAD3CQ5T2N8 411 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 ZNF774Q6NX45 483 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 KIAA1328Q86T90 577 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 MARCH9Q86YJ5 346 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 GPR65Q8IYL9 337 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 SLC39A11Q8N1S5 342 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 KLHL30-AS1Q8NEE0 82 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 DENND6BQ8NEG7 585 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 RHOXF1Q8NHV9 184 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 CCDC26Q8TAB7 109 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 FAM3CQ92520 227 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 PNO1Q9NRX1 252 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms