RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 RNF224P0DH78 156 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 ARAFP10398 606 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 PEPDP12955 493 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 COX4I1P13073 169 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 IL7RP16871 459 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 PSMA4P25789 261 aaKnown RBP12.31□□□□□ -0.44
SSBP1-206ENST00000467681 EIF1P41567 113 aaKnown RBP12.31□□□□□ -0.44
SSBP1-206ENST00000467681 LHX2P50458 406 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 ZNF41P51814 821 aaPredicted RBP12.31□□□□□ -0.44
SSBP1-206ENST00000467681 ADORA2A-AS1P86434 159 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 CDK6Q00534 326 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 SKP2Q13309 424 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 SELPLGQ14242 412 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 CAPRIN1Q14444 709 aaKnown RBP12.31□□□□□ -0.44
SSBP1-206ENST00000467681 TRMT5Q32P41 509 aaKnown RBP12.31□□□□□ -0.44
SSBP1-206ENST00000467681 PLPPR5Q32ZL2 321 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 C1orf185Q5T7R7 199 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 RAET1LQ5VY80 246 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 REP15Q6BDI9 236 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 REEP3Q6NUK4 255 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 TREML1Q86YW5 311 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 MARVELD2Q8N4S9 558 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 FAM71CQ8NEG0 241 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 OR52P1PQ8NH57 321 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 POC1BQ8TC44 478 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 ZPLD1Q8TCW7 415 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 ZBTB8AQ96BR9 441 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 ZNF524Q96C55 264 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 TTYH2Q9BSA4 534 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 KAT8Q9H7Z6 458 aaKnown RBP12.31□□□□□ -0.44
SSBP1-206ENST00000467681 GID8Q9NWU2 228 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 ADAM21Q9UKJ8 722 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 VDAC3Q9Y277 283 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 L3MBTL1Q9Y468 752 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 FAM215AQ9Y5M1 114 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 DSPPQ9NZW4 1301 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 FLNCQ14315 2725 aa12.31□□□□□ -0.44
SSBP1-206ENST00000467681 GCN1Q92616 2671 aaKnown RBP12.3□□□□□ -0.44
SSBP1-206ENST00000467681 CLDN24A6NM45 220 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 C5orf58C9J3I9 102 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 FXYD1O00168 92 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 CYP7B1O75881 506 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 UBTFL6P0CB48 400 aaPredicted RBP12.3□□□□□ -0.44
SSBP1-206ENST00000467681 GLI4P10075 376 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 ETS2P15036 469 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 ZNF708P17019 499 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 SLC6A2P23975 617 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 ADH6P28332 368 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 GZMMP51124 257 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 SMSP52788 366 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 CLDN15P56746 228 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 CLDN18P56856 261 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 MTPNP58546 118 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 SRYQ05066 204 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 PMPCAQ10713 525 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 TOMM34Q15785 309 aaPredicted RBP12.3□□□□□ -0.44
SSBP1-206ENST00000467681 ZSWIM7Q19AV6 140 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 RPS26P11Q5JNZ5 115 aaPredicted RBP12.3□□□□□ -0.44
SSBP1-206ENST00000467681 XKRXQ6PP77 449 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 RPTNQ6XPR3 784 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 B3GNT6Q6ZMB0 384 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 RPRMLQ8N4K4 120 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 POU5F2Q8N7G0 328 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 OR8J3Q8NGG0 315 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 NFKBIDQ8NI38 313 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 BBS10Q8TAM1 723 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 CNOT9Q92600 299 aaKnown RBP12.3□□□□□ -0.44
SSBP1-206ENST00000467681 PSMG3-AS1Q96PY0 264 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 NPAS1Q99742 590 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 TRIM8Q9BZR9 551 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 CALHM2Q9HA72 323 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 EXOSC3Q9NQT5 275 aaKnown RBP12.3□□□□□ -0.44
SSBP1-206ENST00000467681 STOML1Q9UBI4 398 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 CAMK2AQ9UQM7 478 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 IFT52Q9Y366 437 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 GPC6Q9Y625 555 aaPredicted RBP12.3□□□□□ -0.44
SSBP1-206ENST00000467681 AP4B1Q9Y6B7 739 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 RELNP78509 3460 aa12.3□□□□□ -0.44
SSBP1-206ENST00000467681 USP9YO00507 2555 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-206ENST00000467681 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 CD8B2A6NJW9 211 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 SHISA8B8ZZ34 492 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 ETV2O00321 342 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-206ENST00000467681 EFNA2O43921 213 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 NTN1O95631 604 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 NUDT14O95848 222 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 THBS1P07996 1170 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 NID1P14543 1247 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 ZNF17P17021 662 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 PRKCAP17252 672 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 POU3F2P20265 443 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-206ENST00000467681 AGAP20933 346 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 PRDX6P30041 224 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 SUCLG1P53597 346 aaKnown RBP12.29□□□□□ -0.44
SSBP1-206ENST00000467681 NUP107P57740 925 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 RAC1P63000 192 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 PLAURQ03405 335 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 RBBP4Q09028 425 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 CBFBQ13951 182 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 LARS2Q15031 903 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms