RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	CHRNE	Q04844	493 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	LIN52	Q52LA3	116 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	TYW3	Q6IPR3	259 aa	Known RBP	11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	ENPP6	Q6UWR7	440 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	RPTN	Q6XPR3	784 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	CYP4Z1	Q86W10	505 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	DND1	Q8IYX4	353 aa	Known RBP	11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	SVOPL	Q8N434	492 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	ZNF527	Q8NB42	609 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	OR52P1P	Q8NH57	321 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	ASB15	Q8WXK1	588 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	NRBF2	Q96F24	287 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	TPD52L3	Q96J77	140 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	ITPA	Q9BY32	194 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	WWTR1	Q9GZV5	400 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	RUBCNL	Q9H714	662 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	HPF1	Q9NWY4	346 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	RIMS3	Q9UJD0	308 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	FAM32A	Q9Y421	112 aa	Known RBP	11.03	□□□□□ -0.64
CTNS-205	ENST00000467663	KCNE3	Q9Y6H6	103 aa		11.03	□□□□□ -0.64
CTNS-205	ENST00000467663		H0YJX3	145 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	HRK	O00198	91 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	HS6ST1	O60243	411 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	TIPRL	O75663	272 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	OR6B1	O95007	311 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	LGI1	O95970	557 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	CST1	P01037	141 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	NGFR	P08138	427 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	NID1	P14543	1247 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	IL7R	P16871	459 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	RHCE	P18577	417 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	CD247	P20963	164 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	ADH7	P40394	386 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	SOX3	P41225	446 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	PTDSS1	P48651	473 aa	Known RBP	11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	TMED10	P49755	219 aa	Known RBP	11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	ATP12A	P54707	1039 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	ZNF141	Q15928	474 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	ZNF311	Q5JNZ3	666 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	RNF220	Q5VTB9	566 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	IL20RB	Q6UXL0	311 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	FGD2	Q7Z6J4	655 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	GRAMD2A	Q8IUY3	354 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	TAGAP	Q8N103	731 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	PACRGL	Q8N7B6	248 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	ZNF441	Q8N8Z8	693 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	PSD4	Q8NDX1	1056 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	SIMC1	Q8NDZ2	872 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	RMND5B	Q96G75	393 aa	Predicted RBP	11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	C9orf16	Q9BUW7	83 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	DEPP	Q9NTK1	212 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	SH3BGRL2	Q9UJC5	107 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	TINAG	Q9UJW2	476 aa		11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	KLF2	Q9Y5W3	355 aa	Predicted RBP	11.02	□□□□□ -0.65
CTNS-205	ENST00000467663	EXPH5	Q8NEV8	1989 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	GNGT2	O14610	69 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	TFEC	O14948	347 aa	Predicted RBP	11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	ZNF354A	O60765	605 aa	Predicted RBP	11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	ABO	P16442	354 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	AGA	P20933	346 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	ERF	P50548	548 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	GPR85	P60893	370 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	ADORA2A-AS1	P86434	159 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	HSF1	Q00613	529 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	EFR3A	Q14156	821 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	DUSP7	Q16829	419 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	FLYWCH1	Q4VC44	716 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	CMPK2	Q5EBM0	449 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	OGFRL1	Q5TC84	451 aa	Predicted RBP	11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	SP5	Q6BEB4	398 aa	Predicted RBP	11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	OR2T5	Q6IEZ7	315 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	XKRX	Q6PP77	449 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	OPN5	Q6U736	354 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	NPSR1	Q6W5P4	371 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	RTL4	Q6ZR62	310 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	MRGPRG	Q86SM5	289 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	DOLPP1	Q86YN1	238 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	HIPK1	Q86Z02	1210 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	C9orf40	Q8IXQ3	194 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	ZNF440	Q8IYI8	595 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	TOR1AIP2	Q8NFQ8	470 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	OR2T29	Q8NH02	315 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	SLC22A8	Q8TCC7	542 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	LRTOMT	Q8WZ04	291 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	PIK3R3	Q92569	461 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	DIO2	Q92813	273 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	EME1	Q96AY2	570 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	SDCCAG3	Q96C92	435 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	C7orf34	Q96L11	122 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	ZNF300	Q96RE9	604 aa	Predicted RBP	11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	PKP2	Q99959	881 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	NXF5	Q9H1B4	397 aa	Known RBP	11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	UBQLN4	Q9NRR5	601 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	PLSCR2	Q9NRY7	297 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	SLC35A3	Q9Y2D2	325 aa		11.01	□□□□□ -0.65
CTNS-205	ENST00000467663	MEMO1	Q9Y316	297 aa		11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms