RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 FOXB2Q5VYV0 432 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 MED27Q6P2C8 311 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 PRUNE1Q86TP1 453 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 ADGRG3Q86Y34 549 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 GSPT2Q8IYD1 628 aaKnown RBP10.81□□□□□ -0.68
UBR4-210ENST00000466969 CCDC89Q8N998 374 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 RNF214Q8ND24 703 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 OR4N2Q8NGD1 307 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 JADE3Q92613 823 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 ZDHHC16Q969W1 377 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 SLC47A1Q96FL8 570 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 SLC38A2Q96QD8 506 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 DNAJC7Q99615 494 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 B9D2Q9BPU9 175 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 C20orf96Q9NUD7 363 aaPredicted RBP10.81□□□□□ -0.68
UBR4-210ENST00000466969 FLRT3Q9NZU0 649 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 ARHGAP32A7KAX9 2087 aa10.81□□□□□ -0.68
UBR4-210ENST00000466969 A0A1W2PRB8 838 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 TMEM129A0AVI4 362 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 ITGA5P08648 1049 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 MYZAPP0CAP1 466 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 PCSK2P16519 638 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 CDH2P19022 906 aaPredicted RBP10.8□□□□□ -0.68
UBR4-210ENST00000466969 TIA1P31483 386 aaKnown RBP eCLIP10.8□□□□□ -0.68
UBR4-210ENST00000466969 GPC1P35052 558 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 THBS4P35443 961 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 LCN2P80188 198 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 BASP1P80723 227 aaKnown RBP10.8□□□□□ -0.68
UBR4-210ENST00000466969 MRPS35P82673 323 aaKnown RBP10.8□□□□□ -0.68
UBR4-210ENST00000466969 POU3F1Q03052 451 aaPredicted RBP10.8□□□□□ -0.68
UBR4-210ENST00000466969 TGFBR3Q03167 851 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 NR1I3Q14994 352 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 PLPPR5Q32ZL2 321 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 RBM20Q5T481 1227 aaKnown RBP10.8□□□□□ -0.68
UBR4-210ENST00000466969 AVPI1Q5T686 147 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 C9orf135Q5VTT2 229 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 FAM205BPQ63HN1 556 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 C11orf63Q6NUN7 778 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 NPSR1Q6W5P4 371 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 LAS2Q8IYD9 372 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 GLB1L3Q8NCI6 653 aaPredicted RBP10.8□□□□□ -0.68
UBR4-210ENST00000466969 SLC16A11Q8NCK7 471 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 C1orf162Q8NEQ5 155 aaPredicted RBP10.8□□□□□ -0.68
UBR4-210ENST00000466969 NUP37Q8NFH4 326 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 YIPF5Q969M3 257 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 MS4A5Q9H3V2 200 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 DDX31Q9H8H2 851 aaKnown RBP10.8□□□□□ -0.68
UBR4-210ENST00000466969 CNOT10Q9H9A5 744 aaKnown RBP10.8□□□□□ -0.68
UBR4-210ENST00000466969 MED17Q9NVC6 651 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 EMC3Q9P0I2 261 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 SEC14L4Q9UDX3 406 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 OARD1Q9Y530 152 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 U3KQK5 164 aa10.8□□□□□ -0.68
UBR4-210ENST00000466969 NPEPPSL1A6NEC2 478 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 NCF1BA6NI72 391 aaPredicted RBP10.79□□□□□ -0.68
UBR4-210ENST00000466969 NCF1CA8MVU1 366 aaPredicted RBP10.79□□□□□ -0.68
UBR4-210ENST00000466969 SRRM5B3KS81 715 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 LIASO43766 372 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 CYTIPO60759 359 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 ERAL1O75616 437 aaKnown RBP10.79□□□□□ -0.68
UBR4-210ENST00000466969 IGHV2-5P01817 119 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 NCF1P14598 390 aaPredicted RBP10.79□□□□□ -0.68
UBR4-210ENST00000466969 CSNK2A2P19784 350 aaPredicted RBP10.79□□□□□ -0.68
UBR4-210ENST00000466969 TCN1P20061 433 aaPredicted RBP10.79□□□□□ -0.68
UBR4-210ENST00000466969 FOXG1P55316 489 aaPredicted RBP10.79□□□□□ -0.68
UBR4-210ENST00000466969 TBCCQ15814 346 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 PDK4Q16654 411 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 ERCC6LQ2NKX8 1250 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 TMEM176BQ3YBM2 270 aaPredicted RBP10.79□□□□□ -0.68
UBR4-210ENST00000466969 OTUD3Q5T2D3 398 aaPredicted RBP10.79□□□□□ -0.68
UBR4-210ENST00000466969 JAZF1Q86VZ6 243 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 NUDT13Q86X67 352 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 RNF175Q8N4F7 328 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 OR7G3Q8NG95 312 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 ZNF75CPQ92670 426 aaPredicted RBP10.79□□□□□ -0.68
UBR4-210ENST00000466969 RAB8BQ92930 207 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 MARS2Q96GW9 593 aaKnown RBP10.79□□□□□ -0.68
UBR4-210ENST00000466969 PDLIM5Q96HC4 596 aaKnown RBP10.79□□□□□ -0.68
UBR4-210ENST00000466969 ARL5BQ96KC2 179 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 VSTM2LQ96N03 204 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 GBP4Q96PP9 640 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 HHATLQ9HCP6 504 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 REV1Q9UBZ9 1251 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 MALT1Q9UDY8 824 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 NOSIPQ9Y314 301 aaKnown RBP10.79□□□□□ -0.68
UBR4-210ENST00000466969 CSMD3Q7Z407 3707 aa10.79□□□□□ -0.68
UBR4-210ENST00000466969 STAB2Q8WWQ8 2551 aa10.78□□□□□ -0.68
UBR4-210ENST00000466969 M0R233 179 aa10.78□□□□□ -0.68
UBR4-210ENST00000466969 SYNGR3O43761 229 aa10.78□□□□□ -0.68
UBR4-210ENST00000466969 NME6O75414 186 aaPredicted RBP10.78□□□□□ -0.68
UBR4-210ENST00000466969 GBAP04062 536 aa10.78□□□□□ -0.68
UBR4-210ENST00000466969 ELK4P28324 431 aa10.78□□□□□ -0.68
UBR4-210ENST00000466969 SLC7A1P30825 629 aa10.78□□□□□ -0.68
UBR4-210ENST00000466969 BSGP35613 385 aa10.78□□□□□ -0.68
UBR4-210ENST00000466969 GPX6P59796 221 aa10.78□□□□□ -0.68
UBR4-210ENST00000466969 RAC3P60763 192 aa10.78□□□□□ -0.68
UBR4-210ENST00000466969 RPL15P61313 204 aaKnown RBP10.78□□□□□ -0.68
UBR4-210ENST00000466969 MRPS11P82912 194 aaKnown RBP10.78□□□□□ -0.68
UBR4-210ENST00000466969 NAAAQ02083 359 aa10.78□□□□□ -0.68
UBR4-210ENST00000466969 LTB4RQ15722 352 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms