RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 PRKAG1P54619 331 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 AP3S2P59780 193 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 RAP2BP61225 183 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 ACTC1P68032 377 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 ACTA1P68133 377 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 PRR5P85299 388 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 SLC3A1Q07837 685 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 TGM3Q08188 693 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 CRHR2Q13324 411 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 GRIN2CQ14957 1233 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 TCTN1Q2MV58 587 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 TMEM35AQ53FP2 167 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 ACSM3Q53FZ2 586 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 UBE2NLQ5JXB2 153 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 OVCH1Q7RTY7 1134 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 ZNF547Q8IVP9 402 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 LNX2Q8N448 690 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 OR10H4Q8NGA5 316 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 OR11G2Q8NGC1 345 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 OR52L1Q8NGH7 329 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 OR52H1Q8NGJ2 320 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 OR5AR1Q8NGP9 310 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 KLK6Q92876 244 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 MRGPRX3Q96LB0 322 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 SFXN2Q96NB2 322 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 ZFP3Q96NJ6 502 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 UTP23Q9BRU9 249 aaKnown RBP6.78□□□□□ -1.32
USP48-206ENST00000464577 YIPF4Q9BSR8 244 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 QRSL1Q9H0R6 528 aaKnown RBP6.78□□□□□ -1.32
USP48-206ENST00000464577 OR52D1Q9H346 318 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 LDAHQ9H6V9 325 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 ZC4H2Q9NQZ6 224 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 KLHL1Q9NR64 748 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 PIPOXQ9P0Z9 390 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 PLAGL1Q9UM63 463 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 PPIEQ9UNP9 301 aaKnown RBP6.78□□□□□ -1.32
USP48-206ENST00000464577 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.78□□□□□ -1.32
USP48-206ENST00000464577 PCDHGA9Q9Y5G4 932 aaKnown RBP6.78□□□□□ -1.32
USP48-206ENST00000464577 KCNE3Q9Y6H6 103 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 OR2M5A3KFT3 312 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 FAM86C2PA6NEL3 165 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 L7N2F9 121 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 CDC42EP2O14613 210 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 FLRT2O43155 660 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 VEGFDO43915 354 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 ARL6IP5O75915 188 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 OR2A4O95047 310 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 HRGP04196 525 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 RPN2P04844 631 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 IL5P05113 134 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 CD1AP06126 327 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 NMBP08949 121 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 IFNGR1P15260 489 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 CXCL2P19875 107 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 SSR2P43308 183 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 MECP2P51608 486 aaKnown RBP6.78□□□□□ -1.32
USP48-206ENST00000464577 CTAG1AP78358 180 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 RPL6Q02878 288 aaKnown RBP6.78□□□□□ -1.32
USP48-206ENST00000464577 ZNF85Q03923 595 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 ZSWIM7Q19AV6 140 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 RNASE12Q5GAN4 147 aaKnown RBP6.78□□□□□ -1.32
USP48-206ENST00000464577 OLFML2AQ68BL7 652 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 GLDNQ6ZMI3 551 aaPredicted RBP6.78□□□□□ -1.32
USP48-206ENST00000464577 Q6ZTK2 550 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 PARS2Q7L3T8 475 aaKnown RBP6.78□□□□□ -1.32
USP48-206ENST00000464577 HSD17B13Q7Z5P4 300 aaPredicted RBP6.78□□□□□ -1.32
USP48-206ENST00000464577 TMEM25Q86YD3 366 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 NAXDQ8IW45 347 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 AMER3Q8N944 861 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 C17orf47Q8NEP4 570 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 OR10Z1Q8NGY1 313 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 FANK1Q8TC84 345 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 SCARB1Q8WTV0 552 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 TMEM255BQ8WV15 326 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 POF1BQ8WVV4 589 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 AUTS2Q8WXX7 1259 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 THAP4Q8WY91 577 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 KAT2AQ92830 837 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 PTP4A1Q93096 173 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 ELMOD3Q96FG2 381 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 C16orf58Q96GQ5 468 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 C4orf36Q96KX1 117 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 OR2A7Q96R45 310 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 TBX5Q99593 518 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 SARGQ9BW04 601 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 GSDMCQ9BYG8 508 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 HRASLSQ9HDD0 168 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 CMC2Q9NRP2 79 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 HAO2Q9NYQ3 351 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 MGAT4CQ9UBM8 478 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 IL20RAQ9UHF4 553 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 PFDN2Q9UHV9 154 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 ST6GALNAC2Q9UJ37 374 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 ZNF223Q9UK11 482 aaPredicted RBP6.78□□□□□ -1.32
USP48-206ENST00000464577 CA5BQ9Y2D0 317 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 DENND4CQ5VZ89 1909 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 FEZF1A0PJY2 475 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 SLC22A23A1A5C7 686 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 ZC3H12DA2A288 527 aaKnown RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 CDHR4A6H8M9 788 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms