RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 OR5W2Q8NH69 310 aa17.15■□□□□ 0.34
LMNB1-204ENST00000463908 FAM57AQ8TBR7 257 aa17.15■□□□□ 0.34
LMNB1-204ENST00000463908 POC1BQ8TC44 478 aa17.15■□□□□ 0.34
LMNB1-204ENST00000463908 UGT2B28Q9BY64 529 aa17.15■□□□□ 0.34
LMNB1-204ENST00000463908 VDAC3Q9Y277 283 aa17.15■□□□□ 0.34
LMNB1-204ENST00000463908 ZNF443Q9Y2A4 671 aaPredicted RBP17.15■□□□□ 0.34
LMNB1-204ENST00000463908 NBASA2RRP1 2371 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 C15orf38-AP3S2A0A0A6YYH1 394 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 CDHR4A6H8M9 788 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 NME4O00746 187 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 TPST1O60507 370 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 CYP7B1O75881 506 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 THBS1P07996 1170 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 PABPC4LP0CB38 370 aaKnown RBP17.14■□□□□ 0.33
LMNB1-204ENST00000463908 ABOP16442 354 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 PSMA4P25789 261 aaKnown RBP17.14■□□□□ 0.33
LMNB1-204ENST00000463908 AQP1P29972 269 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 STARP49675 285 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 PLPPR5Q32ZL2 321 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 MRPL2Q5T653 305 aaKnown RBP17.14■□□□□ 0.33
LMNB1-204ENST00000463908 IFNEQ86WN2 208 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 CMIPQ8IY22 773 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 ABTB1Q969K4 478 aaPredicted RBP17.14■□□□□ 0.33
LMNB1-204ENST00000463908 REXO5Q96IC2 774 aaKnown RBP17.14■□□□□ 0.33
LMNB1-204ENST00000463908 NSL1Q96IY1 281 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 SPATA9Q9BWV2 254 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 PNPLA3Q9NST1 481 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 DNAJB12Q9NXW2 375 aaKnown RBP17.14■□□□□ 0.33
LMNB1-204ENST00000463908 ACAD8Q9UKU7 415 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 ZNF232Q9UNY5 417 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 ZNF337Q9Y3M9 751 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 FREM3P0C091 2139 aa17.14■□□□□ 0.33
LMNB1-204ENST00000463908 SVILO95425 2214 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 ZNF407Q9C0G0 2248 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 A0A087WZY1 265 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 OR2M5A3KFT3 312 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 M0QX08 132 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 EFNA2O43921 213 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 MFN2O95140 757 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 EPPINO95925 133 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 ACTL6AO96019 429 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 TPOP07202 933 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 CHMP24386 653 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 PCGF2P35227 344 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 SLC7A2P52569 658 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 SUMO3P55854 103 aaPredicted RBP17.13■□□□□ 0.33
LMNB1-204ENST00000463908 SRSF1Q07955 248 aaKnown RBP eCLIP17.13■□□□□ 0.33
LMNB1-204ENST00000463908 DMTNQ08495 405 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 ZNF311Q5JNZ3 666 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 C1QL3Q5VWW1 255 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 ARPINQ7Z6K5 226 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 COMTD1Q86VU5 262 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 TOR1AIP2Q8NFQ8 470 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 OR5M9Q8NGP3 310 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 SARAFQ96BY9 339 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 WDYHV1Q96HA8 205 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 SFXN2Q96NB2 322 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 EXOSC3Q9NQT5 275 aaKnown RBP17.13■□□□□ 0.33
LMNB1-204ENST00000463908 TINAGQ9UJW2 476 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 IFT52Q9Y366 437 aa17.13■□□□□ 0.33
LMNB1-204ENST00000463908 RELNP78509 3460 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 NBPF19A0A087WUL8 3843 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 TRGV8A0A0C4DH27 118 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 C7orf72A4D263 438 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 BCKDKO14874 412 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 NTN1O95631 604 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 CA7P43166 264 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 LHX2P50458 406 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 CRYBA2P53672 197 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 SLC25A3Q00325 362 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 LIPEQ05469 1076 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 LARS2Q15031 903 aaKnown RBP17.12■□□□□ 0.33
LMNB1-204ENST00000463908 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.12■□□□□ 0.33
LMNB1-204ENST00000463908 GLIPR1L2Q4G1C9 344 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 LIN52Q52LA3 116 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 GRAMD2AQ8IUY3 354 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 GTPBP8Q8N3Z3 284 aaPredicted RBP17.12■□□□□ 0.33
LMNB1-204ENST00000463908 TMCO5AQ8N6Q1 288 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 RELTQ969Z4 430 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 DTNBP1Q96EV8 351 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 TMEM181Q9P2C4 612 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 ABCD2Q9UBJ2 740 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 ANGPT4Q9Y264 503 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 AP3M1Q9Y2T2 418 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 ZGRF1Q86YA3 2104 aa17.12■□□□□ 0.33
LMNB1-204ENST00000463908 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.11■□□□□ 0.33
LMNB1-204ENST00000463908 FAM220BPB1ANY3 271 aa17.11■□□□□ 0.33
LMNB1-204ENST00000463908 ETV2O00321 342 aaPredicted RBP17.11■□□□□ 0.33
LMNB1-204ENST00000463908 AP3D1O14617 1153 aa17.11■□□□□ 0.33
LMNB1-204ENST00000463908 PRRG2O14669 202 aa17.11■□□□□ 0.33
LMNB1-204ENST00000463908 SEMA7AO75326 666 aa17.11■□□□□ 0.33
LMNB1-204ENST00000463908 NUDT14O95848 222 aa17.11■□□□□ 0.33
LMNB1-204ENST00000463908 GKN3PP0CG01 181 aa17.11■□□□□ 0.33
LMNB1-204ENST00000463908 ESRRAP11474 423 aaPredicted RBP17.11■□□□□ 0.33
LMNB1-204ENST00000463908 PRKCAP17252 672 aa17.11■□□□□ 0.33
LMNB1-204ENST00000463908 IL11P20809 199 aa17.11■□□□□ 0.33
LMNB1-204ENST00000463908 RYKP34925 604 aa17.11■□□□□ 0.33
LMNB1-204ENST00000463908 CPOXP36551 454 aa17.11■□□□□ 0.33
LMNB1-204ENST00000463908 ACAA2P42765 397 aaKnown RBP17.11■□□□□ 0.33
LMNB1-204ENST00000463908 CCR4P51679 360 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms