RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	ZNF708	P17019	499 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	PPIB	P23284	216 aa	Known RBP	8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	GRN	P28799	593 aa	Known RBP	8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	SFTPD	P35247	375 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	AGFG1	P52594	562 aa	Known RBP	8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	CRISP3	P54108	245 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	TPD52	P55327	224 aa	Predicted RBP	8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	CLDN18	P56856	261 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	CLDN20	P56880	219 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	GNGT1	P63211	74 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	KLF10	Q13118	480 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	CBFB	Q13951	182 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	GNA13	Q14344	377 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	CAPRIN1	Q14444	709 aa	Known RBP	8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	RGN	Q15493	299 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	TOMM34	Q15785	309 aa	Predicted RBP	8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	SGCB	Q16585	318 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	PLPPR5	Q32ZL2	321 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	GLYR1	Q49A26	553 aa	Predicted RBP	8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	GCNT6	Q5T4J0	391 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	NSUN5P2	Q63ZY6	315 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	LRRC74B	Q6ZQY2	392 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	CPLX4	Q7Z7G2	160 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	SNX32	Q86XE0	403 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	LACC1	Q8IV20	430 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	MSRB3	Q8IXL7	192 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	PEX5L	Q8IYB4	626 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	OR5W2	Q8NH69	310 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	FBXO27	Q8NI29	283 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	NFKBID	Q8NI38	313 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	ZNF563	Q8TA94	476 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	GPR119	Q8TDV5	335 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	WDR60	Q8WVS4	1066 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	MAL2	Q969L2	176 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	ZBTB8A	Q96BR9	441 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	ZG16B	Q96DA0	208 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	TMEM19	Q96HH6	336 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	PINK1	Q9BXM7	581 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	PRRG4	Q9BZD6	226 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	TRIM8	Q9BZR9	551 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	UCK2	Q9BZX2	261 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	LAT2	Q9GZY6	243 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	NSRP1	Q9H0G5	558 aa	Known RBP	8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	SLC38A1	Q9H2H9	487 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	RUBCNL	Q9H714	662 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	MTHFD2L	Q9H903	347 aa	Predicted RBP	8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	TMEM45A	Q9NWC5	275 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	CALML5	Q9NZT1	146 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	VAPA	Q9P0L0	249 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	ARMCX1	Q9P291	453 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970		Q9UFV3	132 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	ICAM5	Q9UMF0	924 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	CAPN7	Q9Y6W3	813 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	HCFC1	P51610	2035 aa		8.68	□□□□□ -1.02
PSMD4-208	ENST00000462970	CELSR2	Q9HCU4	2923 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	LOC100653049	A0A140TA62	436 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	SLC22A20	A6NK97	555 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	HSPB2	A8KAH6	182 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	LINC01387	J3KSC0	135 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	MPDZ	O75970	2070 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	KRT34	O76011	436 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	DBI	P07108	87 aa	Known RBP	8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	TFPT	P0C1Z6	253 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	TMIGD3	P0DMS9	266 aa	Predicted RBP	8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	ZNF17	P17021	662 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	PGC	P20142	388 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	CCNA2	P20248	432 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	AGA	P20933	346 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	BMP5	P22003	454 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	EIF1	P41567	113 aa	Known RBP	8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	EIF1AX	P47813	144 aa	Known RBP	8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	SUCLG1	P53597	346 aa	Known RBP	8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	MVD	P53602	400 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	SUMO3	P55854	103 aa	Predicted RBP	8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	CLDN15	P56746	228 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	EEFSEC	P57772	596 aa	Known RBP	8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	RPS3A	P61247	264 aa	Known RBP	8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	KCNJ10	P78508	379 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	CACNA1D	Q01668	2161 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	MERTK	Q12866	999 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	SKP2	Q13309	424 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	ART3	Q13508	389 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	FGFBP1	Q14512	234 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	QPRT	Q15274	297 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	MAPRE2	Q15555	327 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	HSPB2	Q16082	182 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	CYP51A1	Q16850	503 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	LRIF1	Q5T3J3	769 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	RIPPLY2	Q5TAB7	128 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	SP5	Q6BEB4	398 aa	Predicted RBP	8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	ZNF787	Q6DD87	383 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	SEM1	Q6ZVN7	128 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	SPATA21	Q7Z572	469 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	RETREG3	Q86VR2	466 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	VRK2	Q86Y07	508 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	GCNT2	Q8N0V5	402 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	C9orf106	Q8NAJ2	232 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	OR52P1P	Q8NH57	321 aa		8.67	□□□□□ -1.02
PSMD4-208	ENST00000462970	ZPLD1	Q8TCW7	415 aa		8.67	□□□□□ -1.02

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms