RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 WDR60Q8WVS4 1066 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 ST8SIA1Q92185 356 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 PMM1Q92871 262 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 NTNG2Q96CW9 530 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 NEURL3Q96EH8 262 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 LURAP1Q96LR2 239 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 UCN2Q96RP3 112 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 TMEM185BQ9H7F4 350 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 DNAJB12Q9NXW2 375 aaKnown RBP8.08□□□□□ -1.12
DDX39B-216ENST00000462421 ELOVL5Q9NYP7 299 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 EMC3Q9P0I2 261 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.08□□□□□ -1.12
DDX39B-216ENST00000462421 MKLN1Q9UL63 735 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 HRH3Q9Y5N1 445 aa8.08□□□□□ -1.12
DDX39B-216ENST00000462421 HIVEP3Q5T1R4 2406 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 NPIPA5A0A0B4J1W7 369 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 A0A1W2PNV4 684 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 FAM234BA2RU67 622 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 EVPLLA8MZ36 301 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 NPIPA7E9PJI5 369 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 NR5A2O00482 541 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 MSTNO14793 375 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 ANGPT2O15123 496 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 KIAA0513O60268 411 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 ZIC3O60481 467 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 DBIP07108 87 aaKnown RBP8.07□□□□□ -1.12
DDX39B-216ENST00000462421 LINGO3P0C6S8 592 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 NPIPA8P0DM63 369 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 DNASE1P24855 282 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 GTF2E2P29084 291 aaKnown RBP8.07□□□□□ -1.12
DDX39B-216ENST00000462421 RYKP34925 604 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 SOX18P35713 384 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 AQP5P55064 265 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 CASP9P55211 416 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 WNT3P56703 355 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 DSTNP60981 165 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 ZNF117Q03924 483 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 MERTKQ12866 999 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 MPP2Q14168 576 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 SQLEQ14534 574 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 EXOC3L2Q2M3D2 409 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 PLPPR5Q32ZL2 321 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 FBXL19-AS1Q494R0 122 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 TIGD2Q4W5G0 525 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 LIN52Q52LA3 116 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 SAXO2Q658L1 398 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 BEND4Q6ZU67 534 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 RNF130Q86XS8 419 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 SLC43A2Q8N370 569 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 OR6K3Q8NGY3 331 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 OR10D3Q8NH80 312 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 FBXO27Q8NI29 283 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 PNPT1Q8TCS8 783 aaKnown RBP8.07□□□□□ -1.12
DDX39B-216ENST00000462421 MIPOL1Q8TD10 442 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 ZFP90Q8TF47 636 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 RNF138Q8WVD3 245 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 HOXB13Q92826 284 aaPredicted RBP8.07□□□□□ -1.12
DDX39B-216ENST00000462421 RAB8BQ92930 207 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 DDIT4LQ96D03 193 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 GMPPAQ96IJ6 420 aaPredicted RBP8.07□□□□□ -1.12
DDX39B-216ENST00000462421 MARK4Q96L34 752 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 MAGEB18Q96M61 343 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 TRNT1Q96Q11 434 aaKnown RBP8.07□□□□□ -1.12
DDX39B-216ENST00000462421 SDF2Q99470 211 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 CCDC28BQ9BUN5 200 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 THUMPD3Q9BV44 507 aaKnown RBP8.07□□□□□ -1.12
DDX39B-216ENST00000462421 SPATA5L1Q9BVQ7 753 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 TRIM8Q9BZR9 551 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 C20orf27Q9GZN8 174 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 LAT2Q9GZY6 243 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 CLEC4MQ9H2X3 399 aaPredicted RBP8.07□□□□□ -1.12
DDX39B-216ENST00000462421 KLHL9Q9P2J3 617 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 CLCF1Q9UBD9 225 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 RPS6KB2Q9UBS0 482 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 DIDO1Q9BTC0 2240 aaKnown RBP8.07□□□□□ -1.12
DDX39B-216ENST00000462421 CROCCQ5TZA2 2017 aa8.07□□□□□ -1.12
DDX39B-216ENST00000462421 COL12A1Q99715 3063 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 SH3D21A4FU49 640 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 ZNF195O14628 629 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 CXCL13O43927 109 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 H6PDO95479 791 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 GSNP06396 782 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 EPXP11678 715 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 PPP3CBP16298 524 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 ENPP1P22413 925 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 APOBEC1P41238 236 aaKnown RBP8.06□□□□□ -1.12
DDX39B-216ENST00000462421 MAP3K8P41279 467 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 RNF144AP50876 292 aaPredicted RBP8.06□□□□□ -1.12
DDX39B-216ENST00000462421 CLDN20P56880 219 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 QPRTQ15274 297 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 CD226Q15762 336 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 ZNF141Q15928 474 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 TMEM176BQ3YBM2 270 aaPredicted RBP8.06□□□□□ -1.12
DDX39B-216ENST00000462421 SLC9B1Q4ZJI4 515 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 KLHL26Q53HC5 615 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 LRRC74BQ6ZQY2 392 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 FAM214BQ7L5A3 538 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 LIX1LQ8IVB5 337 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 CLEC4FQ8N1N0 589 aa8.06□□□□□ -1.12
DDX39B-216ENST00000462421 NAXEQ8NCW5 288 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms