RNA–Protein interactions for RNA: ENST00000460100.1

IMP4-207, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-207ENST00000460100 RIPPLY2Q5TAB7 128 aa13.06□□□□□ -0.32
IMP4-207ENST00000460100 PRAMEF8Q5VWM4 474 aa13.06□□□□□ -0.32
IMP4-207ENST00000460100 PRAMEF7Q5VXH5 474 aa13.06□□□□□ -0.32
IMP4-207ENST00000460100 RAET1LQ5VY80 246 aa13.06□□□□□ -0.32
IMP4-207ENST00000460100 EIF3MQ7L2H7 374 aaKnown RBP13.06□□□□□ -0.32
IMP4-207ENST00000460100 MAMDC2Q7Z304 686 aaPredicted RBP13.06□□□□□ -0.32
IMP4-207ENST00000460100 METTL25Q8N6Q8 603 aa13.06□□□□□ -0.32
IMP4-207ENST00000460100 OR5M1Q8NGP8 315 aa13.06□□□□□ -0.32
IMP4-207ENST00000460100 RND1Q92730 232 aa13.06□□□□□ -0.32
IMP4-207ENST00000460100 ANKRD27Q96NW4 1050 aa13.06□□□□□ -0.32
IMP4-207ENST00000460100 TREX2Q9BQ50 279 aaPredicted RBP13.06□□□□□ -0.32
IMP4-207ENST00000460100 TUBA1CQ9BQE3 449 aa13.06□□□□□ -0.32
IMP4-207ENST00000460100 CPPED1Q9BRF8 314 aaPredicted RBP13.06□□□□□ -0.32
IMP4-207ENST00000460100 CALHM2Q9HA72 323 aa13.06□□□□□ -0.32
IMP4-207ENST00000460100 EXOSC3Q9NQT5 275 aaKnown RBP13.06□□□□□ -0.32
IMP4-207ENST00000460100 ALKBH4Q9NXW9 302 aa13.06□□□□□ -0.32
IMP4-207ENST00000460100 PLEKHB1Q9UF11 243 aaPredicted RBP13.06□□□□□ -0.32
IMP4-207ENST00000460100 CAMK2AQ9UQM7 478 aa13.06□□□□□ -0.32
IMP4-207ENST00000460100 RNF6Q9Y252 685 aa13.06□□□□□ -0.32
IMP4-207ENST00000460100 VDAC3Q9Y277 283 aa13.06□□□□□ -0.32
IMP4-207ENST00000460100 SLC35A3Q9Y2D2 325 aa13.06□□□□□ -0.32
IMP4-207ENST00000460100 KLF2Q9Y5W3 355 aaPredicted RBP13.06□□□□□ -0.32
IMP4-207ENST00000460100 AP4B1Q9Y6B7 739 aa13.06□□□□□ -0.32
IMP4-207ENST00000460100 A0A0G2JNJ9 132 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 A0A0G2JPF8 293 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 MBD3L4A6NDZ8 208 aaPredicted RBP13.05□□□□□ -0.32
IMP4-207ENST00000460100 MBD3L3A6NE82 208 aaPredicted RBP13.05□□□□□ -0.32
IMP4-207ENST00000460100 MBD3L5A6NJ08 208 aaPredicted RBP13.05□□□□□ -0.32
IMP4-207ENST00000460100 CLDN24A6NM45 220 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 HNRNPCL2B2RXH8 293 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 HNRNPCL3B7ZW38 293 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 SHISA8B8ZZ34 492 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 GTPBP1O00178 669 aaKnown RBP13.05□□□□□ -0.32
IMP4-207ENST00000460100 EFNA2O43921 213 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 HNRNPCL1O60812 293 aaKnown RBP13.05□□□□□ -0.32
IMP4-207ENST00000460100 CSTAP01040 98 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 BCHEP06276 602 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 HNRNPCL4P0DMR1 293 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 PRKCAP17252 672 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 EIF1P41567 113 aaKnown RBP13.05□□□□□ -0.32
IMP4-207ENST00000460100 ZNF41P51814 821 aaPredicted RBP13.05□□□□□ -0.32
IMP4-207ENST00000460100 SUCLG1P53597 346 aaKnown RBP13.05□□□□□ -0.32
IMP4-207ENST00000460100 CRISP3P54108 245 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 TOMM34Q15785 309 aaPredicted RBP13.05□□□□□ -0.32
IMP4-207ENST00000460100 ADRM1Q16186 407 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 DHDDSQ86SQ9 333 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 GGNQ86UU5 652 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 LACC1Q8IV20 430 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 CMIPQ8IY22 773 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 ZNF614Q8N883 585 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 MBD3L2Q8NHZ7 208 aaPredicted RBP13.05□□□□□ -0.32
IMP4-207ENST00000460100 MAL2Q969L2 176 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 TMEM19Q96HH6 336 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 CGREF1Q99674 301 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 TMEM38AQ9H6F2 299 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.05□□□□□ -0.32
IMP4-207ENST00000460100 CALML5Q9NZT1 146 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 Q9UFV3 132 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 GPC6Q9Y625 555 aaPredicted RBP13.05□□□□□ -0.32
IMP4-207ENST00000460100 NBPF19A0A087WUL8 3843 aa13.05□□□□□ -0.32
IMP4-207ENST00000460100 MED12LQ86YW9 2145 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 INTS1Q8N201 2190 aaKnown RBP13.04□□□□□ -0.32
IMP4-207ENST00000460100 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 A1L4Q6 167 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 GMNCA6NCL1 334 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 H0YC42 278 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 FXYD1O00168 92 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 SNX3O60493 162 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 ADAM11O75078 769 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 CLDN14O95500 239 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 DBIP07108 87 aaKnown RBP13.04□□□□□ -0.32
IMP4-207ENST00000460100 ARAFP10398 606 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 GP1BBP13224 206 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 NID1P14543 1247 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 POU3F2P20265 443 aaPredicted RBP13.04□□□□□ -0.32
IMP4-207ENST00000460100 CHRNB4P30926 498 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 TPD52P55327 224 aaPredicted RBP13.04□□□□□ -0.32
IMP4-207ENST00000460100 CLDN20P56880 219 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 RAC1P63000 192 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 GNA13Q14344 377 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 CTU2Q2VPK5 515 aaKnown RBP13.04□□□□□ -0.32
IMP4-207ENST00000460100 POMZP3Q6PJE2 187 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 SPATA21Q7Z572 469 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 HMGN2P46Q86SG4 172 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 NAXEQ8NCW5 288 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 LILRB4Q8NHJ6 448 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 ASB5Q8WWX0 329 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 SDCCAG3Q96C92 435 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 ADGRG7Q96K78 797 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 MRGPRX4Q96LA9 322 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 RNF145Q96MT1 663 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 ELAC2Q9BQ52 826 aaKnown RBP13.04□□□□□ -0.32
IMP4-207ENST00000460100 THUMPD3Q9BV44 507 aaKnown RBP13.04□□□□□ -0.32
IMP4-207ENST00000460100 RSPO3Q9BXY4 272 aaPredicted RBP13.04□□□□□ -0.32
IMP4-207ENST00000460100 DNAJB12Q9NXW2 375 aaKnown RBP13.04□□□□□ -0.32
IMP4-207ENST00000460100 COQ3Q9NZJ6 369 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 CLCF1Q9UBD9 225 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 CORO2BQ9UQ03 480 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 CHST2Q9Y4C5 530 aa13.04□□□□□ -0.32
IMP4-207ENST00000460100 UNC79Q9P2D8 2635 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms