RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 NADK2Q4G0N4 442 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 PDZK1Q5T2W1 519 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 SYT6Q5T7P8 510 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 MFSD4BQ5TF39 518 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 TMEM164Q5U3C3 297 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 UBE2UQ5VVX9 321 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 FIGNL1Q6PIW4 674 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 PTCHD4Q6ZW05 846 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 B3GNT8Q7Z7M8 397 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 RBM45Q8IUH3 476 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 SPARTQ8N0X7 666 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 POGLUT1Q8NBL1 392 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 OR9Q2Q8NGE9 314 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 OR2Y1Q8NGV0 311 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 FAM81AQ8TBF8 368 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 RAB2BQ8WUD1 216 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 TMEM234Q8WY98 164 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 MUL1Q969V5 352 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 ZG16BQ96DA0 208 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 SPSB2Q99619 263 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 PRSS27Q9BQR3 290 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 GPR87Q9BY21 358 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 OR8D2Q9GZM6 311 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 ISYNA1Q9NPH2 558 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 RLIMQ9NVW2 624 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 KCNE5Q9UJ90 142 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 ASCC3Q8N3C0 2202 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 ARPC4-TTLL3A0A0A6YYG9 625 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 UNC119BA6NIH7 251 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 CLDN24A6NM45 220 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 CPSF4LA6NMK7 179 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 ETV2O00321 342 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 FAM20BO75063 409 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 CNOT3O75175 753 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 TRMUO75648 421 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 DKK1O94907 266 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 IGKV1D-16P01601 117 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 TP53P04637 393 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 CDK1P06493 297 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 BMP7P18075 431 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 YAP1P46937 504 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 PRPS1P60891 318 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 IL1RL1Q01638 556 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 SKP2Q13309 424 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 ERV3-1Q14264 604 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 MFSD13AQ14CX5 517 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 VWA2Q5GFL6 755 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 CCNJQ5T5M9 372 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 PLAG1Q6DJT9 500 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 ZNF620Q6ZNG0 422 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 RTL4Q6ZR62 310 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 SLCO6A1Q86UG4 719 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 COMTD1Q86VU5 262 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 GID4Q8IVV7 300 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 OR2T33Q8NG76 320 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 OR13F1Q8NGS4 319 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 ST8SIA1Q92185 356 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 TSLPQ969D9 159 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 GTPBP3Q969Y2 492 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 CRB3Q9BUF7 120 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 RBCK1Q9BYM8 510 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 NXF5Q9H1B4 397 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 ANKRA2Q9H9E1 313 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 SIAEQ9HAT2 523 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 MMP25Q9NPA2 562 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 RSL24D1Q9UHA3 163 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC7A7Q9UM01 511 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 A0A1B0GWA3 101 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 FAM86C2PA6NEL3 165 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 H3BN98 237 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 GTPBP1O00178 669 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 PEX12O00623 359 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 FADS1O60427 444 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 FZD7O75084 574 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 CDC123O75794 336 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 SEC24DO94855 1032 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 MT-ATP6P00846 226 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 LINGO3P0C6S8 592 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 ACVR2AP27037 513 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 HTR2AP28223 471 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 ELK4P28324 431 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC1A3P43003 542 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 CENPAP49450 140 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 ST13P50502 369 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 C17orf67Q0P5P2 114 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 PLCXD2Q0VAA5 305 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 RAB40BQ12829 278 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 GTF2IRD2BQ6EKJ0 949 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 LAIR2Q6ISS4 152 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 PAPD4Q6PIY7 484 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 IGF2-ASQ6U949 168 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 B3GNT6Q6ZMB0 384 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 KCTD8Q6ZWB6 473 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 PIP4P1Q86T03 277 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 GTF2IRD2Q86UP8 949 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 C9orf40Q8IXQ3 194 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 LNX2Q8N448 690 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 ESX1Q8N693 406 aa6.28□□□□□ -1.4
ECHDC1-210ENST00000454859 SUMF1Q8NBK3 374 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms