RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 CXorf58Q96LI9 332 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 KLHL15Q96M94 604 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ASB16Q96NS5 453 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 LRRC3BQ96PB8 259 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SLC22A12Q96S37 553 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 LYSMD1Q96S90 227 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CNN2Q99439 309 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 KXD1Q9BQD3 176 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MRPL45Q9BRJ2 306 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 ALG8Q9BVK2 526 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PCBD2Q9H0N5 130 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CDT1Q9H211 546 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 RRAGCQ9HB90 399 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CRLF2Q9HC73 371 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CHST11Q9NPF2 352 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ZDHHC4Q9NPG8 344 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 UBQLN4Q9NRR5 601 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR5AC2Q9NZP5 309 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 GSKIPQ9P0R6 139 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR52A1Q9UKL2 312 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 EMCNQ9ULC0 261 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ATXN7L1Q9ULK2 861 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 SLC7A11Q9UPY5 501 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CARHSP1Q9Y2V2 147 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 MRPS23Q9Y3D9 190 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 PEAK1Q9H792 1746 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SSC5DA1L4H1 1573 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SYNDIG1LA6NDD5 238 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 DUXAA6NLW8 204 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MARCH11A6NNE9 402 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 GTPBP1O00178 669 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 ACKR2O00590 384 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 FFAR3O14843 346 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 GPR42O15529 346 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ZNF207O43670 478 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 TLX2O43763 284 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 ZNF623O75123 536 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CELF2O95319 508 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 NFATC1O95644 943 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 S1PR4O95977 384 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ATP1B1P05026 303 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ICAM1P05362 532 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR4E1P0C645 316 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 EPXP11678 715 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 EPORP19235 508 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TBXA2RP21731 343 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 NMBRP28336 390 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 LIPAP38571 399 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 KIR2DL3P43628 341 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 EVX1P49640 407 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 P2RY4P51582 365 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CASP7P55210 303 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 RAP1BP61224 184 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ARF6P62330 175 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 GABREP78334 506 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 RPL24P83731 157 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 SLAMF1Q13291 335 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 IRF5Q13568 498 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MPPE1Q53F39 396 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 DMRTA1Q5VZB9 504 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR52W1Q6IF63 320 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 POMZP3Q6PJE2 187 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CD300LGQ6UXG3 332 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 IL20RBQ6UXL0 311 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 KCTD9Q7L273 389 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 C16orf59Q7L2K0 433 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SYT13Q7L8C5 426 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PRICKLE2Q7Z3G6 844 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TMPRSS9Q7Z410 1059 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TMEM173Q86WV6 379 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 SIAH3Q8IW03 269 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SERPINA12Q8IW75 414 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CRYBG2Q8N1P7 616 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 DTWD1Q8N5C7 304 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ZNF321PQ8N8H1 164 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 POGLUT1Q8NBL1 392 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR56A1Q8NGH5 318 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR10D4PQ8NGN7 298 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR13C4Q8NGS5 318 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR51A7Q8NH64 312 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 IL31RAQ8NI17 732 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ZNF596Q8TC21 504 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SLC2A12Q8TD20 617 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 GLYATL1Q969I3 302 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 RBMXL1Q96E39 390 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 ZBED6CLQ96FA7 236 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 MSLNLQ96KJ4 702 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PACRGQ96M98 296 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 COPS8Q99627 209 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SUCNR1Q9BXA5 334 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TBL1XR1Q9BZK7 514 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ZNF385DQ9H6B1 395 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PLEKHA2Q9HB19 425 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 RDH14Q9HBH5 336 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ARNT2Q9HBZ2 717 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 C1orf123Q9NWV4 160 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ENPP4Q9Y6X5 453 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 NRAPQ86VF7 1730 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TNS2Q63HR2 1409 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 LOC105369274A0A096LPK9 316 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms