RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 TRIM40Q6P9F5 258 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 DLK2Q6UY11 383 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 LINC01465Q8N7H1 131 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 ZSCAN1Q8NBB4 408 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 OR1S2Q8NGQ3 325 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 SLC7A13Q8TCU3 470 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 SCLYQ96I15 445 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 ZC3H10Q96K80 434 aaKnown RBP8.04□□□□□ -1.12
LSM5-208ENST00000450169 FRG2BQ96QU4 278 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 EDEM2Q9BV94 578 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 OPA3Q9H6K4 179 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 ZFAND3Q9H8U3 227 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 KLHL1Q9NR64 748 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 TMEM248Q9NWD8 314 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 MCM3APO60318 1980 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 C17orf113A0A1B0GUU1 675 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 UBE2QL1A1L167 161 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 RNASET2O00584 256 aaKnown RBP8.04□□□□□ -1.12
LSM5-208ENST00000450169 HYAL3O43820 417 aaPredicted RBP8.04□□□□□ -1.12
LSM5-208ENST00000450169 POP4O95707 220 aaKnown RBP8.04□□□□□ -1.12
LSM5-208ENST00000450169 HPGDP15428 266 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 ABOP16442 354 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 NFYBP25208 207 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 SLC6A11P48066 632 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 POU3F4P49335 361 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 ART1P52961 327 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 HCCSP53701 268 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 CDH11P55287 796 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 CCL23P55773 120 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 HBA1P69905 142 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 SLC3A1Q07837 685 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 CHAF1BQ13112 559 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 C21orf62-AS1Q17RA5 79 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 TCTN3Q6NUS6 607 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 TAPT1Q6NXT6 567 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 ZNF322Q6U7Q0 402 aaPredicted RBP8.04□□□□□ -1.12
LSM5-208ENST00000450169 APOOLQ6UXV4 268 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 OR2W3Q7Z3T1 314 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 GPR142Q7Z601 462 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 TECPR1Q7Z6L1 1165 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 FAM169BQ8N8A8 192 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 OR52B4Q8NGK2 314 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 RHBDD1Q8TEB9 315 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 APOBEC4Q8WW27 367 aaKnown RBP8.04□□□□□ -1.12
LSM5-208ENST00000450169 TCTEX1D2Q8WW35 142 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 C14orf144Q96I85 54 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 WRAP53Q9BUR4 548 aaKnown RBP8.04□□□□□ -1.12
LSM5-208ENST00000450169 ASF1BQ9NVP2 202 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 GULP1Q9UBP9 304 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 RUVBL1Q9Y265 456 aaKnown RBP8.04□□□□□ -1.12
LSM5-208ENST00000450169 PCDHGA5Q9Y5G8 931 aa8.04□□□□□ -1.12
LSM5-208ENST00000450169 TRAPPC13A5PLN9 417 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 KDM4EB2RXH2 506 aaPredicted RBP8.03□□□□□ -1.12
LSM5-208ENST00000450169 E7EQ34 232 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 GOSR2O14653 212 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 IMPA2O14732 288 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 KRT33AO76009 404 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 EPHX1P07099 455 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 ANXA5P08758 320 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 SAGP10523 405 aaPredicted RBP8.03□□□□□ -1.12
LSM5-208ENST00000450169 SNRPBP14678 240 aaKnown RBP8.03□□□□□ -1.12
LSM5-208ENST00000450169 RNF144AP50876 292 aaPredicted RBP8.03□□□□□ -1.12
LSM5-208ENST00000450169 LUMP51884 338 aaPredicted RBP8.03□□□□□ -1.12
LSM5-208ENST00000450169 BACE1P56817 501 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 SORDQ00796 357 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 ACSM2AQ08AH3 577 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 NDUFA9Q16795 377 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 TMEM44Q2T9K0 475 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 C1orf53Q5VUE5 145 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 ACSM2BQ68CK6 577 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 CD300LDQ6UXZ3 194 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 ZNF783Q6ZMS7 281 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 RHOUQ7L0Q8 258 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 LINGO2Q7L985 606 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 CAMKMTQ7Z624 323 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 IZUMO1Q8IYV9 350 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 SLC43A2Q8N370 569 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 LKAAEAR1Q8TD35 194 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 CPNE4Q96A23 557 aaPredicted RBP8.03□□□□□ -1.12
LSM5-208ENST00000450169 ZNF649Q9BS31 505 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 GGACTQ9BVM4 153 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 BRD9Q9H8M2 597 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 RDH14Q9HBH5 336 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 ZDHHC4Q9NPG8 344 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 PRDM5Q9NQX1 630 aaPredicted RBP8.03□□□□□ -1.12
LSM5-208ENST00000450169 ACSS1Q9NUB1 689 aaPredicted RBP8.03□□□□□ -1.12
LSM5-208ENST00000450169 VPS29Q9UBQ0 182 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 OR14I1A6ND48 311 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 SEPT4O43236 478 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 RAMP2O60895 175 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 LILRB5O75023 590 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 IGHA1P01876 353 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 ARAFP10398 606 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 NDUFB7P17568 137 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 MMP11P24347 488 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 PAX6P26367 422 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 MECP2P51608 486 aaKnown RBP8.03□□□□□ -1.12
LSM5-208ENST00000450169 RAB2AP61019 212 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 BDH1Q02338 343 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 TLE2Q04725 743 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms