RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 GPR83Q9NYM4 423 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 KLRF1Q9NZS2 232 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 OAZ3Q9UMX2 235 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 CARD8Q9Y2G2 431 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 SAMHD1Q9Y3Z3 626 aaKnown RBP17.6■□□□□ 0.41
RPS28-202ENST00000449223 TESMINQ9Y4I5 508 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 LOC400499M0QZD8 3231 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 RRP8O43159 456 aaKnown RBP17.59■□□□□ 0.41
RPS28-202ENST00000449223 OIP5O43482 229 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 SCO2O43819 266 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 H1F0P07305 194 aaKnown RBP17.59■□□□□ 0.41
RPS28-202ENST00000449223 CCL3P10147 92 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 MSX1P28360 303 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 CDH12P55289 794 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 HOXC5Q00444 222 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 SPIBQ01892 262 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 TLE3Q04726 772 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 ST3GAL3Q11203 375 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 MFAP5Q13361 173 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 TUBA3CQ13748 450 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 GANABQ14697 944 aaKnown RBP17.59■□□□□ 0.41
RPS28-202ENST00000449223 OR1Q1Q15612 314 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 NDUFAF6Q330K2 333 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 SWT1Q5T5J6 900 aaKnown RBP17.59■□□□□ 0.41
RPS28-202ENST00000449223 TUBA3EQ6PEY2 450 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 IGFL2Q6UWQ7 119 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 CCDC81Q6ZN84 652 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 ZDHHC13Q8IUH4 622 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 CATSPER1Q8NEC5 780 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 OR5W2Q8NH69 310 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 PSD2Q9BQI7 771 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 C9orf16Q9BUW7 83 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 OSBPL10Q9BXB5 764 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 PROK2Q9HC23 129 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 GALNT9Q9HCQ5 603 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 EML6Q6ZMW3 1958 aa17.59■□□□□ 0.41
RPS28-202ENST00000449223 A0A0B4J2E0 115 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 A0A1B0GX12 115 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 TRAPPC13A5PLN9 417 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 ARRDC5A6NEK1 342 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 HCRTR2O43614 444 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 NEURL1O76050 574 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 GADD45GO95257 159 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 THY1P04216 161 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 UQCRBP14927 111 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 CASRP41180 1078 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 IST1P53990 364 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 TAS2R41P59536 307 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 DEFB109BQ30KR1 87 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 BICRALQ6AI39 1079 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 PLEKHM3Q6ZWE6 761 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 TMEM179BQ7Z7N9 219 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 HIPK1Q86Z02 1210 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 ICA1LQ8NDH6 482 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 DUSP19Q8WTR2 217 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 EME1Q96AY2 570 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 CIB1Q99828 191 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 UTP23Q9BRU9 249 aaKnown RBP17.58■□□□□ 0.41
RPS28-202ENST00000449223 FNDC11Q9BVV2 318 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 GABARAPL1Q9H0R8 117 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 VCX3BQ9H321 246 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 TMEM27Q9HBJ8 222 aa17.58■□□□□ 0.41
RPS28-202ENST00000449223 CPSF4LA6NMK7 179 aaKnown RBP17.57■□□□□ 0.4
RPS28-202ENST00000449223 B4DXG7 233 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 TNFRSF11BO00300 401 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 E2F6O75461 281 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 SNX4O95219 450 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 LYPD3O95274 346 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 LINGO3P0C6S8 592 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 ZNF23P17027 643 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 FUT4P22083 530 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 ELAVL4P26378 380 aaKnown RBP17.57■□□□□ 0.4
RPS28-202ENST00000449223 CD96P40200 585 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 DLX5P56178 289 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 CBFBQ13951 182 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 LPCAT4Q643R3 524 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 PPP4R4Q6NUP7 873 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 MDGA2Q7Z553 956 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 PACRGLQ8N7B6 248 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 PSD4Q8NDX1 1056 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 B4GALNT2Q8NHY0 566 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 SLC7A13Q8TCU3 470 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 HAS2Q92819 552 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 SLC41A3Q96GZ6 507 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 TMEM41AQ96HV5 264 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 PRR14Q9BWN1 585 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 LRFN1Q9P244 771 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 U3KQV3 271 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 LAMA5O15230 3695 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 URB1O60287 2271 aaKnown RBP17.57■□□□□ 0.4
RPS28-202ENST00000449223 ANKUB1A6NFN9 424 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 SAC3D1A6NKF1 404 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 G3V2T6 193 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 K7ENP7 123 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 ETV2O00321 342 aaPredicted RBP17.57■□□□□ 0.4
RPS28-202ENST00000449223 CHP2O43745 196 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 CYP7B1O75881 506 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 WDPCPO95876 746 aa17.57■□□□□ 0.4
RPS28-202ENST00000449223 ZNF26P17031 533 aaPredicted RBP17.57■□□□□ 0.4
RPS28-202ENST00000449223 PGCP20142 388 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms