RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SNPHO15079 494 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 NME2P1O60361 137 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 PRSS23O95084 383 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 SP1P08047 785 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 FCGR1AP12314 374 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 RHCEP18577 417 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 NME2P22392 152 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 HTR2AP28223 471 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 SLC6A8P48029 635 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 COL28A1Q2UY09 1125 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 SLC25A25Q6KCM7 469 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 ZNF605Q86T29 641 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 TMCO5AQ8N6Q1 288 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 FADS6Q8N9I5 356 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 WDSUB1Q8N9V3 476 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 OR5W2Q8NH69 310 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 TM9SF4Q92544 642 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 EXTL1Q92935 676 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 ARSGQ96EG1 525 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 ZNF347Q96SE7 839 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 POLR2J2Q9GZM3 115 aaKnown RBP12.81□□□□□ -0.36
SHMT2-203ENST00000449049 POLR2J3Q9H1A7 115 aaKnown RBP12.81□□□□□ -0.36
SHMT2-203ENST00000449049 DCLRE1BQ9H816 532 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 A4GNTQ9UNA3 340 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 FRYQ5TBA9 3013 aa12.81□□□□□ -0.36
SHMT2-203ENST00000449049 A0A0G2JMM0 328 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 A0A1W2PPB8 328 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 A0A1W2PRS3 328 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 KIR3DP1A8MWS1 328 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 G3V3Y1 287 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 J3KTA2 159 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 DPM1O60762 260 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 CD46P15529 392 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 DNASE1L1P49184 302 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 CBFBQ13951 182 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 RCN1Q15293 331 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 INPP5JQ15735 1006 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-203ENST00000449049 ATP6AP1Q15904 470 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 ENTPD8Q5MY95 495 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 TSPYL5Q86VY4 417 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-203ENST00000449049 LSMEM1Q8N8F7 131 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 CATSPER1Q8NEC5 780 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 OR2M3Q8NG83 312 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 PRRC1Q96M27 445 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 C5orf34Q96MH7 638 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 KLHDC3Q9BQ90 382 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 ZNF559Q9BR84 538 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 HES7Q9BYE0 225 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.8□□□□□ -0.36
SHMT2-203ENST00000449049 AGPAT4Q9NRZ5 378 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 KLF13Q9Y2Y9 288 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-203ENST00000449049 PCDHGB6Q9Y5F9 930 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 CSAG2Q9Y5P2 127 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 APC2O95996 2303 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 CELSR3Q9NYQ7 3312 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 ANKUB1A6NFN9 424 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 FFAR1O14842 300 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 DIRAS1O95057 198 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 FASP25445 335 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 YAP1P46937 504 aaKnown RBP12.8□□□□□ -0.36
SHMT2-203ENST00000449049 CCR4P51679 360 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 OR5M10Q6IEU7 315 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 CYP4Z1Q86W10 505 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 PLCZ1Q86YW0 608 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 LILRA2Q8N149 483 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 GPR119Q8TDV5 335 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 LRTOMTQ8WZ04 291 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 NR4A3Q92570 626 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 ZNF570Q96NI8 536 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 PIP5K1AQ99755 562 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 FAM173AQ9BQD7 235 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 PRR14Q9BWN1 585 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 TRIM2Q9C040 744 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 MED11Q9P086 117 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 NTNG1Q9Y2I2 539 aa12.8□□□□□ -0.36
SHMT2-203ENST00000449049 FAM32AQ9Y421 112 aaKnown RBP12.8□□□□□ -0.36
SHMT2-203ENST00000449049 H0Y3Z8 333 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 SMNDC1O75940 238 aaKnown RBP eCLIP12.79□□□□□ -0.366e-6■□□□□ 8.8
SHMT2-203ENST00000449049 CST1P01037 141 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 PDGFAP04085 211 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 UQCRBP14927 111 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 PGCP20142 388 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 ELAVL4P26378 380 aaKnown RBP12.79□□□□□ -0.36
SHMT2-203ENST00000449049 RYKP34925 604 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 CD97P48960 835 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 GPR85P60893 370 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 PIN1Q13526 163 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-203ENST00000449049 OR1Q1Q15612 314 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 ZNF766Q5HY98 468 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 TIGD3Q6B0B8 471 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 OR2T5Q6IEZ7 315 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 HMBOX1Q6NT76 420 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 SULF2Q8IWU5 870 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 OR2M7Q8NG81 312 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 OR1J4Q8NGS1 313 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 OR2T29Q8NH02 315 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 ADAMTS16Q8TE57 1224 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 DHRS1Q96LJ7 313 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 ZNF597Q96LX8 424 aa12.79□□□□□ -0.36
SHMT2-203ENST00000449049 PKP2Q99959 881 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms