RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 RNF6Q9Y252 685 aa15.78■□□□□ 0.12
SMARCAL1-209ENST00000444508 GMEB1Q9Y692 573 aa15.78■□□□□ 0.12
SMARCAL1-209ENST00000444508 AP4B1Q9Y6B7 739 aa15.78■□□□□ 0.12
SMARCAL1-209ENST00000444508 CAPN7Q9Y6W3 813 aa15.78■□□□□ 0.12
SMARCAL1-209ENST00000444508 SETXQ7Z333 2677 aaKnown RBP15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 C7orf72A4D263 438 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 SHISA8B8ZZ34 492 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 SLC22A2O15244 555 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 CCDC22O60826 627 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 CLDN1O95832 211 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 NUDT7P0C024 238 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 BMP2P12643 396 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 IL7RP16871 459 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 CHRNB4P30926 498 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 GNGT1P63211 74 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 KCNJ10P78508 379 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 SKP2Q13309 424 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 TMEM44Q2T9K0 475 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 MMEL1Q495T6 779 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 GCNT6Q5T4J0 391 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 CPLX4Q7Z7G2 160 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 RETREG3Q86VR2 466 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 CMIPQ8IY22 773 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 GPR119Q8TDV5 335 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 CA5BP1Q8WTZ4 195 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 WDR60Q8WVS4 1066 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 SMPDL3BQ92485 455 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 CGREF1Q99674 301 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 ELAC2Q9BQ52 826 aaKnown RBP15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 TUBA1CQ9BQE3 449 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 CALHM2Q9HA72 323 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 A4GALTQ9NPC4 353 aa15.77■□□□□ 0.12
SMARCAL1-209ENST00000444508 ARHGAP21Q5T5U3 1957 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 A0A0G2JPF8 293 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 GMNCA6NCL1 334 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 BBIP1A8MTZ0 92 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 HNRNPCL2B2RXH8 293 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 HNRNPCL3B7ZW38 293 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 SEC14L5O43304 696 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 HNRNPCL1O60812 293 aaKnown RBP15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 CLDN14O95500 239 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 LINGO3P0C6S8 592 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 HNRNPCL4P0DMR1 293 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 PGCP20142 388 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 ME2P23368 584 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 PGM1P36871 562 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 ART3Q13508 389 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 MAPK11Q15759 364 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 RUNDC3AQ59EK9 446 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 RIPPLY2Q5TAB7 128 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 PRAMEF8Q5VWM4 474 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 PRAMEF7Q5VXH5 474 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 NSUN5P2Q63ZY6 315 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 CCDC71Q8IV32 467 aaPredicted RBP15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 METTL25Q8N6Q8 603 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 ARSGQ96EG1 525 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 RNF145Q96MT1 663 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 ANKRD27Q96NW4 1050 aa15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 TREX2Q9BQ50 279 aaPredicted RBP15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 CPPED1Q9BRF8 314 aaPredicted RBP15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 THUMPD3Q9BV44 507 aaKnown RBP15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 GPC6Q9Y625 555 aaPredicted RBP15.76■□□□□ 0.11
SMARCAL1-209ENST00000444508 DSPPQ9NZW4 1301 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 CD8B2A6NJW9 211 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 CLCA1A8K7I4 914 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 HSPB2A8KAH6 182 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 IL2RAP01589 272 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 GP1BBP13224 206 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 GPX2P18283 190 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 RPS4Y1P22090 263 aaKnown RBP15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 ADH6P28332 368 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 RPS3AP61247 264 aaKnown RBP15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 FOXF1Q12946 379 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 CYLC2Q14093 348 aaPredicted RBP15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 LARS2Q15031 903 aaKnown RBP15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 QPRTQ15274 297 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 HSPB2Q16082 182 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 TRMT5Q32P41 509 aaKnown RBP15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 LIN52Q52LA3 116 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 COQ5Q5HYK3 327 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 RPS26P11Q5JNZ5 115 aaPredicted RBP15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 SNX32Q86XE0 403 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 FAM71CQ8NEG0 241 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 OR52P1PQ8NH57 321 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 FBXO27Q8NI29 283 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 BBS10Q8TAM1 723 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 MAL2Q969L2 176 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 KLHDC3Q9BQ90 382 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 IKZF5Q9H5V7 419 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 EXOSC3Q9NQT5 275 aaKnown RBP15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 ARMCX1Q9P291 453 aa15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 KLF2Q9Y5W3 355 aaPredicted RBP15.75■□□□□ 0.11
SMARCAL1-209ENST00000444508 A0A0G2JNJ9 132 aa15.74■□□□□ 0.11
SMARCAL1-209ENST00000444508 LOC100653049A0A140TA62 436 aa15.74■□□□□ 0.11
SMARCAL1-209ENST00000444508 CLDN24A6NM45 220 aa15.74■□□□□ 0.11
SMARCAL1-209ENST00000444508 PRSS44E7EML9 344 aa15.74■□□□□ 0.11
SMARCAL1-209ENST00000444508 FBP2O00757 339 aa15.74■□□□□ 0.11
SMARCAL1-209ENST00000444508 MRASO14807 208 aa15.74■□□□□ 0.11
SMARCAL1-209ENST00000444508 KRT34O76011 436 aa15.74■□□□□ 0.11
SMARCAL1-209ENST00000444508 ARAFP10398 606 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms