RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 COL28A1Q2UY09 1125 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 TBCELQ5QJ74 424 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 TIGD3Q6B0B8 471 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 ZFP1Q6P2D0 407 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 AAGABQ6PD74 315 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 ZNF550Q7Z398 422 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 ZNF440Q8IYI8 595 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 C10orf67Q8IYJ2 551 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 FADS6Q8N9I5 356 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 OR2M3Q8NG83 312 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 OR5W2Q8NH69 310 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 B4GALNT2Q8NHY0 566 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 GPR119Q8TDV5 335 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 TMEM41AQ96HV5 264 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 ZNF300Q96RE9 604 aaPredicted RBP6.82□□□□□ -1.32
UBR3-205ENST00000439681 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.82□□□□□ -1.32
UBR3-205ENST00000439681 DSN1Q9H410 356 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 SDHAF3Q9NRP4 125 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 FBXL2Q9UKC9 423 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 SLC13A4Q9UKG4 626 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 A4GNTQ9UNA3 340 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 SLC9A8Q9Y2E8 581 aa6.82□□□□□ -1.32
UBR3-205ENST00000439681 LRRC3CA6NJW4 275 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 GNB5O14775 395 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 SNPHO15079 494 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 PEX1O43933 1283 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 GMFGO60234 142 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 FMO6PO60774 539 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 TIPRLO75663 272 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 LYPD3O95274 346 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 FABP3P05413 133 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 HOXB6P17509 224 aaKnown RBP6.81□□□□□ -1.32
UBR3-205ENST00000439681 MST1P26927 711 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 MSX1P28360 303 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 RYKP34925 604 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 P2RX1P51575 399 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 PIN1Q13526 163 aaPredicted RBP6.81□□□□□ -1.32
UBR3-205ENST00000439681 ZNF766Q5HY98 468 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 PACS2Q86VP3 889 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 PLCZ1Q86YW0 608 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 LILRA2Q8N149 483 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 LSMEM1Q8N8F7 131 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 OR2M7Q8NG81 312 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 LRTOMTQ8WZ04 291 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 SLC39A7Q92504 469 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 GNRHR2Q96P88 292 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 MCHR1Q99705 422 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 FAM173AQ9BQD7 235 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 KLHL1Q9NR64 748 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 TUBA8Q9NY65 449 aaPredicted RBP6.81□□□□□ -1.32
UBR3-205ENST00000439681 PPP4R1LQ9P1A2 415 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 ACAD8Q9UKU7 415 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 PCDHGB7Q9Y5F8 929 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 MED13Q9UHV7 2174 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 ANKUB1A6NFN9 424 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 H0YHG0 523 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 FAAHO00519 579 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 HNRNPRO43390 633 aaKnown RBP6.81□□□□□ -1.32
UBR3-205ENST00000439681 LINGO3P0C6S8 592 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 RFPL3SP0C7P2 107 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 FAM87AP0C7U9 286 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 CD46P15529 392 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 RHCEP18577 417 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 IDH2P48735 452 aaKnown RBP6.81□□□□□ -1.32
UBR3-205ENST00000439681 FOXK2Q01167 660 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 KCNAB2Q13303 367 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 OR1Q1Q15612 314 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 ENTPD8Q5MY95 495 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 HMBOX1Q6NT76 420 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 C19orf48Q6RUI8 117 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 ARSKQ6UWY0 536 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 DEF8Q6ZN54 512 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 Q6ZS92 163 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 GALNTL5Q7Z4T8 443 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 ZNF605Q86T29 641 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 LSRQ86X29 649 aaPredicted RBP6.81□□□□□ -1.32
UBR3-205ENST00000439681 ZADH2Q8N4Q0 377 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 RBMXL3Q8N7X1 1067 aaKnown RBP6.81□□□□□ -1.32
UBR3-205ENST00000439681 TOR1AIP2Q8NFQ8 470 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 C5orf34Q96MH7 638 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 NPAS1Q99742 590 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 PKP2Q99959 881 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 ZNF559Q9BR84 538 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 NTN4Q9HB63 628 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 ZFP64Q9NPA5 681 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 CTPS2Q9NRF8 586 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 VNN3Q9NY84 501 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 NKX1-2Q9UD57 310 aaPredicted RBP6.81□□□□□ -1.32
UBR3-205ENST00000439681 TESQ9UGI8 421 aaKnown RBP6.81□□□□□ -1.32
UBR3-205ENST00000439681 KLF13Q9Y2Y9 288 aaPredicted RBP6.81□□□□□ -1.32
UBR3-205ENST00000439681 PCDHGB6Q9Y5F9 930 aa6.81□□□□□ -1.32
UBR3-205ENST00000439681 MGAQ8IWI9 3026 aa6.8□□□□□ -1.32
UBR3-205ENST00000439681 ZZEF1O43149 2961 aa6.8□□□□□ -1.32
UBR3-205ENST00000439681 ANKRD11Q6UB99 2663 aaPredicted RBP6.8□□□□□ -1.32
UBR3-205ENST00000439681 TRAV17A0A0B4J275 112 aa6.8□□□□□ -1.32
UBR3-205ENST00000439681 CPSF4LA6NMK7 179 aaKnown RBP6.8□□□□□ -1.32
UBR3-205ENST00000439681 ETV2O00321 342 aaPredicted RBP6.8□□□□□ -1.32
UBR3-205ENST00000439681 CLOCKO15516 846 aa6.8□□□□□ -1.32
UBR3-205ENST00000439681 ZIC3O60481 467 aa6.8□□□□□ -1.32
UBR3-205ENST00000439681 CDC40O60508 579 aaKnown RBP eCLIP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms