RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 CCNYL1Q8N7R7 359 aa9.87□□□□□ -0.83
CSTF3-203ENST00000438862 SEMA6DQ8NFY4 1073 aa9.87□□□□□ -0.83
CSTF3-203ENST00000438862 OR2M3Q8NG83 312 aa9.87□□□□□ -0.83
CSTF3-203ENST00000438862 FAM216AQ8WUB2 273 aa9.87□□□□□ -0.83
CSTF3-203ENST00000438862 KISS1RQ969F8 398 aaPredicted RBP9.87□□□□□ -0.83
CSTF3-203ENST00000438862 ATP6V1E2Q96A05 226 aa9.87□□□□□ -0.83
CSTF3-203ENST00000438862 ESAMQ96AP7 390 aa9.87□□□□□ -0.83
CSTF3-203ENST00000438862 C7orf26Q96N11 449 aa9.87□□□□□ -0.83
CSTF3-203ENST00000438862 CCT7Q99832 543 aa9.87□□□□□ -0.83
CSTF3-203ENST00000438862 BRINP2Q9C0B6 783 aa9.87□□□□□ -0.83
CSTF3-203ENST00000438862 C12orf49Q9H741 205 aa9.87□□□□□ -0.83
CSTF3-203ENST00000438862 NOL11Q9H8H0 719 aaKnown RBP9.87□□□□□ -0.83
CSTF3-203ENST00000438862 ZNF639Q9UID6 485 aa9.87□□□□□ -0.83
CSTF3-203ENST00000438862 MGAT4BQ9UQ53 548 aa9.87□□□□□ -0.83
CSTF3-203ENST00000438862 GPR55Q9Y2T6 319 aaPredicted RBP9.87□□□□□ -0.83
CSTF3-203ENST00000438862 PMF1-BGLAPU3KQ54 211 aa9.87□□□□□ -0.83
CSTF3-203ENST00000438862 GOLGA8QA0A0J9YX86 632 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 GOLGA8OA6NCC3 632 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 E7EQL1 145 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 GOLGA8NF8WBI6 632 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 H0YIV9 168 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 OR7A17O14581 309 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 EIF1AYO14602 144 aaKnown RBP9.86□□□□□ -0.83
CSTF3-203ENST00000438862 EEDO75530 441 aaKnown RBP9.86□□□□□ -0.83
CSTF3-203ENST00000438862 ENO1P06733 434 aaKnown RBP9.86□□□□□ -0.83
CSTF3-203ENST00000438862 PABPC4LP0CB38 370 aaKnown RBP9.86□□□□□ -0.83
CSTF3-203ENST00000438862 EPORP19235 508 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 BGNP21810 368 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 IL12BP29460 328 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 AGTR1P30556 359 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 SLC1A6P48664 564 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 FABP6P51161 128 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 CCNG1P51959 295 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 CDH13P55290 713 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 MGAT2Q10469 447 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 BST1Q10588 318 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 SCGB2A2Q13296 93 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 CUL3Q13618 768 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 EXOSC7Q15024 291 aaKnown RBP9.86□□□□□ -0.83
CSTF3-203ENST00000438862 PPA1Q15181 289 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 ARL13AQ5H913 290 aaPredicted RBP9.86□□□□□ -0.83
CSTF3-203ENST00000438862 MFSD12Q6NUT3 480 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 FAM111BQ6SJ93 734 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 DEF8Q6ZN54 512 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 Q6ZSR9 355 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 GPRIN3Q6ZVF9 776 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 GGNQ86UU5 652 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 LRRC17Q8N6Y2 441 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 ZNF540Q8NDQ6 660 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 OR5M1Q8NGP8 315 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 HUS1BQ8NHY5 278 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 TRPC4APQ8TEL6 797 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 C3orf49Q96BT1 292 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 MUCL1Q96DR8 90 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 ZNF717Q9BY31 904 aaPredicted RBP9.86□□□□□ -0.83
CSTF3-203ENST00000438862 PFDN4Q9NQP4 134 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 NOP53Q9NZM5 478 aaKnown RBP9.86□□□□□ -0.83
CSTF3-203ENST00000438862 MED11Q9P086 117 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 RAP2CQ9Y3L5 183 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 PCDHGA11Q9Y5H2 935 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 TRRAPQ9Y4A5 3859 aa9.86□□□□□ -0.83
CSTF3-203ENST00000438862 PCNX3Q9H6A9 2034 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 IGHV4-61A0A0C4DH41 118 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 LOC390937A0A1W2PQ73 354 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 SERTM1A2A2V5 107 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 TRIM77I1YAP6 450 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 TMPRSS2O15393 492 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 TGDSO95455 350 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 ADAP00813 363 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 ATP1B1P05026 303 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 ZNF23P17027 643 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 PCMT1P22061 227 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 EMDP50402 254 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 PHEXP78562 749 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 TNP2Q05952 138 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 TRAF3Q13114 568 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 DDX39BQ13838 428 aaKnown RBP9.85□□□□□ -0.83
CSTF3-203ENST00000438862 DOC2BQ14184 412 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 IQCCQ4KMZ1 466 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 MIDNQ504T8 468 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 FBXO48Q5FWF7 155 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 TMEM201Q5SNT2 666 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 GRHL2Q6ISB3 625 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 ZNF544Q6NX49 715 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 LARP4Q71RC2 724 aaKnown RBP eCLIP9.85□□□□□ -0.83
CSTF3-203ENST00000438862 BHLHA15Q7RTS1 189 aaPredicted RBP9.85□□□□□ -0.83
CSTF3-203ENST00000438862 P2RY8Q86VZ1 359 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 NUDT13Q86X67 352 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 WDR75Q8IWA0 830 aaKnown RBP9.85□□□□□ -0.83
CSTF3-203ENST00000438862 OR10D3Q8NH80 312 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 ZNF418Q8TF45 676 aaPredicted RBP9.85□□□□□ -0.83
CSTF3-203ENST00000438862 C1GALT1C1Q96EU7 318 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 NSUN5Q96P11 429 aaKnown RBP9.85□□□□□ -0.83
CSTF3-203ENST00000438862 MTERF1Q99551 399 aaKnown RBP9.85□□□□□ -0.83
CSTF3-203ENST00000438862 MYOZ1Q9NP98 299 aaPredicted RBP9.85□□□□□ -0.83
CSTF3-203ENST00000438862 MAT2BQ9NZL9 334 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 ARMCX1Q9P291 453 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 POU2F3Q9UKI9 436 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 NOTCH1P46531 2555 aa9.85□□□□□ -0.83
CSTF3-203ENST00000438862 PLCE1Q9P212 2302 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms