RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 DMKNQ6E0U4 476 aaPredicted RBP2.28□□□□□ -2.04
CLK1-204ENST00000432425 RAET1GQ6H3X3 334 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 ZNF544Q6NX49 715 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 C8orf74Q6P047 294 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 PMF1Q6P1K2 205 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 TTC23LQ6PF05 361 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 CD164L2Q6UWJ8 174 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 GPR142Q7Z601 462 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 ADGRD2Q7Z7M1 963 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 LRRC34Q8IZ02 419 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 SYCE1Q8N0S2 351 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 BATF2Q8N1L9 274 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 GPR137CQ8N3F9 429 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 CSGALNACT2Q8N6G5 542 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 ANKFN1Q8N957 763 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 RELL2Q8NC24 303 aaPredicted RBP2.28□□□□□ -2.04
CLK1-204ENST00000432425 BHLHE23Q8NDY6 225 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 STEAP2Q8NFT2 490 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 OR6M1Q8NGM8 313 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 MAIP1Q8WWC4 291 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 HAS2Q92819 552 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 PPP1R14BQ96C90 147 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 VSIG2Q96IQ7 327 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 ZBTB18Q99592 522 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 TRIM9Q9C026 710 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 POLR1EQ9GZS1 481 aaKnown RBP2.28□□□□□ -2.04
CLK1-204ENST00000432425 VCX2Q9H322 139 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 CALHM2Q9HA72 323 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 NUDT15Q9NV35 164 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 FKBP14Q9NWM8 211 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 DDX19BQ9UMR2 479 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 CBY1Q9Y3M2 126 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 KIF27Q86VH2 1401 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 SH3TC1Q8TE82 1336 aa2.28□□□□□ -2.04
CLK1-204ENST00000432425 COL4A4P53420 1690 aaPredicted RBP2.28□□□□□ -2.04
CLK1-204ENST00000432425 A0A087WZY1 265 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 A0A1B0GTQ1 180 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 TMEM129A0AVI4 362 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 GOLGA8MH3BSY2 632 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 TRDMT1O14717 391 aaKnown RBP2.28□□□□□ -2.05
CLK1-204ENST00000432425 XPO1O14980 1071 aaKnown RBP2.28□□□□□ -2.05
CLK1-204ENST00000432425 TOM1L1O75674 476 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 CBR3O75828 277 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 CLPXO76031 633 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 STBD1O95210 358 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 IGHV3-9P01782 118 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 IVLP07476 585 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 ASNSP08243 561 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 NUDT17P0C025 328 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 PABPC4LP0CB38 370 aaKnown RBP2.28□□□□□ -2.05
CLK1-204ENST00000432425 PVRP15151 417 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 CYP2F1P24903 491 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 HOXA6P31267 233 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 CDKN1BP46527 198 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 WNT4P56705 351 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 SPIBQ01892 262 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 SRSF5Q13243 272 aaKnown RBP2.28□□□□□ -2.05
CLK1-204ENST00000432425 SCGB2A2Q13296 93 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 BCL2A1Q16548 175 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 MPPE1Q53F39 396 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 MS4A13Q5J8X5 152 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 PRAMEF7Q5VXH5 474 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 RTL6Q6ICC9 239 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 STEAP1BQ6NZ63 245 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 ZNF530Q6P9A1 599 aaPredicted RBP2.28□□□□□ -2.05
CLK1-204ENST00000432425 TOM1L2Q6ZVM7 507 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 NCCRP1Q6ZVX7 275 aaPredicted RBP2.28□□□□□ -2.05
CLK1-204ENST00000432425 EFL1Q7Z2Z2 1120 aaKnown RBP2.28□□□□□ -2.05
CLK1-204ENST00000432425 CDR2LQ86X02 465 aaPredicted RBP2.28□□□□□ -2.05
CLK1-204ENST00000432425 C12orf56Q8IXR9 622 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 OFCC1Q8IZS5 231 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 LINC00518Q8N0U6 118 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 ARFGAP2Q8N6H7 521 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 DNAAF3Q8N9W5 541 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 SPATA4Q8NEY3 305 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 BBS1Q8NFJ9 593 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 OR52B4Q8NGK2 314 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 UBTD2Q8WUN7 234 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 TFB1MQ8WVM0 346 aaKnown RBP2.28□□□□□ -2.05
CLK1-204ENST00000432425 DNAJA4Q8WW22 397 aaPredicted RBP2.28□□□□□ -2.05
CLK1-204ENST00000432425 KIFAP3Q92845 792 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 FAM122AQ96E09 287 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 EEF2KMTQ96G04 330 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 TPD52L3Q96J77 140 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 CAPNS2Q96L46 248 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 ZNF285Q96NJ3 590 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 CCT7Q99832 543 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 FAM192AQ9GZU8 254 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 SIRPDQ9H106 197 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 AZI2Q9H6S1 392 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 CYP3A43Q9HB55 503 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 NTN4Q9HB63 628 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 ETNK2Q9NVF9 386 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 STX18Q9P2W9 335 aaKnown RBP2.28□□□□□ -2.05
CLK1-204ENST00000432425 SLC9A8Q9Y2E8 581 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 NTNG1Q9Y2I2 539 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 MAB21L2Q9Y586 359 aa2.28□□□□□ -2.05
CLK1-204ENST00000432425 PARD3Q8TEW0 1356 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 TNRQ92752 1358 aa2.27□□□□□ -2.05
CLK1-204ENST00000432425 FANCIQ9NVI1 1328 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms