RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 A0A075B6Q4 140 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 ISPDA4D126 451 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 RHPN2P1A8MT19 583 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 GPX5O75715 221 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 LYPD3O95274 346 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 TSPAN19P0C672 248 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 IFI30P13284 250 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 MYF5P13349 255 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 HTR2AP28223 471 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 HTR1FP30939 366 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 ETV5P41161 510 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 ETV1P50549 477 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 GAS1P54826 345 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 CDH11P55287 796 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 DSG2Q14126 1118 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 ZNF141Q15928 474 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 TRIM16LQ309B1 348 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 ARMC4Q5T2S8 1044 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 SLC30A6Q6NXT4 461 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 DGAT2L6Q6ZPD8 337 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 MEX3DQ86XN8 651 aaKnown RBP11.86□□□□□ -0.51
DDX56-204ENST00000431640 GID4Q8IVV7 300 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 PSD4Q8NDX1 1056 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 OR4Q3Q8NH05 313 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 MMABQ96EY8 250 aaPredicted RBP11.86□□□□□ -0.51
DDX56-204ENST00000431640 VSTM2LQ96N03 204 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 C6orf62Q9GZU0 229 aaPredicted RBP11.86□□□□□ -0.51
DDX56-204ENST00000431640 NUAK2Q9H093 628 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 UBQLN3Q9H347 655 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 GAREM1Q9H706 876 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 ENAMQ9NRM1 1142 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 RXFP3Q9NSD7 469 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 SIDT1Q9NXL6 827 aaKnown RBP11.86□□□□□ -0.51
DDX56-204ENST00000431640 PRODH2Q9UF12 536 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 BAIAP2Q9UQB8 552 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 UGT2A1Q9Y4X1 527 aa11.86□□□□□ -0.51
DDX56-204ENST00000431640 MUC6Q6W4X9 2439 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 LY6G6EA0A0G2JKS1 128 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 CENPVL1A0A0U1RR11 272 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 LNP1A1A4G5 178 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 CHP2O43745 196 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 PIP5K1CO60331 668 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 MED26O95402 600 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 CTSBP07858 339 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 HBQ1P09105 142 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 PRG2P13727 222 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 CRYBB2P43320 205 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 ATP12AP54707 1039 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 FUT7Q11130 342 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 TPBGQ13641 420 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 ZNF267Q14586 743 aaPredicted RBP11.85□□□□□ -0.51
DDX56-204ENST00000431640 MED25Q71SY5 747 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 PHC2Q8IXK0 858 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 LSMEM1Q8N8F7 131 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 OR7G1Q8NGA0 311 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 OR51Q1Q8NH59 317 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 RNF217Q8TC41 542 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 SAP25Q8TEE9 199 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 BPIFA2Q96DR5 249 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 AHCYL2Q96HN2 611 aaKnown RBP11.85□□□□□ -0.51
DDX56-204ENST00000431640 LOXL4Q96JB6 756 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 SAMD8Q96LT4 415 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 TGM7Q96PF1 710 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 CNPPD1Q9BV87 410 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 JAM3Q9BX67 310 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 ASPNQ9BXN1 380 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 HOXD1Q9GZZ0 328 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 OR52D1Q9H346 318 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 EXOSC4Q9NPD3 245 aaKnown RBP11.85□□□□□ -0.51
DDX56-204ENST00000431640 GPR52Q9Y2T5 361 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 U3KQA8 63 aa11.85□□□□□ -0.51
DDX56-204ENST00000431640 NPIPA5A0A0B4J1W7 369 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 A0A0B4J2E0 115 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 A0A1B0GX12 115 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 NPIPA7E9PJI5 369 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 ZNF670-ZNF695F2Z2N8 137 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 CDC42EP2O14613 210 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 HCN1O60741 890 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 NPIPA8P0DM63 369 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 GPR3P46089 330 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 GCGRP47871 477 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 RORCP51449 518 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 RPS3AP61247 264 aaKnown RBP11.84□□□□□ -0.51
DDX56-204ENST00000431640 FGFBP1Q14512 234 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 OXA1LQ15070 435 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 SF3A2Q15428 464 aaKnown RBP11.84□□□□□ -0.51
DDX56-204ENST00000431640 ZNF181Q2M3W8 571 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 PDZK1Q5T2W1 519 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 SLC35F3Q8IY50 421 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 ZNF440Q8IYI8 595 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 GALNT6Q8NCL4 622 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 CEP76Q8TAP6 659 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 FANK1Q8TC84 345 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 CNOT9Q92600 299 aaKnown RBP11.84□□□□□ -0.51
DDX56-204ENST00000431640 MVB12AQ96EY5 273 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 DPH1Q9BZG8 443 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 OR10A5Q9H207 317 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 PARD6AQ9NPB6 346 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 DAPK2Q9UIK4 370 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 MMACHCQ9Y4U1 282 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms