RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 GIMAP1Q8WWP7 306 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 ACOT11Q8WXI4 607 aaPredicted RBP11.61□□□□□ -0.55
CDH3-202ENST00000429102 MS4A6EQ96DS6 147 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 ZBP1Q9H171 429 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.61□□□□□ -0.55
CDH3-202ENST00000429102 RDH8Q9NYR8 311 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 COL4A6Q14031 1691 aa11.61□□□□□ -0.55
CDH3-202ENST00000429102 ZNF542PQ5EBM4 170 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 AADACL4Q5VUY2 407 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 SIGIRRQ6IA17 410 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 VITQ6UXI7 678 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 GET4Q7L5D6 327 aaPredicted RBP11.6□□□□□ -0.55
CDH3-202ENST00000429102 PRSS41Q7RTY9 318 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 ZNF687Q8N1G0 1237 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 FTMTQ8N4E7 242 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 SLC44A3Q8N4M1 653 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 ABHD4Q8TB40 342 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 SNX33Q8WV41 574 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 WDR89Q96FK6 387 aaPredicted RBP11.6□□□□□ -0.55
CDH3-202ENST00000429102 OR14A2Q96R54 314 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 TNFRSF13CQ96RJ3 184 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 IGFLR1Q9H665 355 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 PAK6Q9NQU5 681 aaPredicted RBP11.6□□□□□ -0.55
CDH3-202ENST00000429102 PCDHGB7Q9Y5F8 929 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 NOTCH4Q99466 2003 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 TBC1D3DA0A087WVF3 549 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 TBC1D3IA0A087WXS9 549 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 TBC1D3EA0A087X179 549 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 TBC1D3KA0A087X1G2 549 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 TBC1D3FA6NER0 549 aaPredicted RBP11.6□□□□□ -0.55
CDH3-202ENST00000429102 TBC1D3LB9A6J9 549 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 EMC8O43402 210 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 SIX6O95475 246 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 TCRBP04435 133 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 ANKRD34CP0C6C1 535 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 TBC1D3HP0C7X1 549 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 PCSK2P16519 638 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 HLA-DMAP28067 261 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 CCR4P51679 360 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 SGCGQ13326 291 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 TBC1D3GQ6DHY5 549 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 VASNQ6EMK4 673 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 TBC1D3CQ6IPX1 549 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 SLC39A5Q6ZMH5 540 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 PARGQ86W56 976 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 TBC1D3Q8IZP1 549 aaPredicted RBP11.6□□□□□ -0.55
CDH3-202ENST00000429102 OR4C6Q8NH72 309 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 LCN9Q8WX39 176 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 PEX11GQ96HA9 241 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 NARS2Q96I59 477 aaKnown RBP11.6□□□□□ -0.55
CDH3-202ENST00000429102 SEC22CQ9BRL7 303 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 NDC1Q9BTX1 674 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 KCNN2Q9H2S1 579 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 DPAGT1Q9H3H5 408 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 TRIM36Q9NQ86 728 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 C12orf4Q9NQ89 552 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 SIDT1Q9NXL6 827 aaKnown RBP11.6□□□□□ -0.55
CDH3-202ENST00000429102 A0A0G2JPF8 293 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 C4orf47A7E2U8 309 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 HNRNPCL3B7ZW38 293 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 DOK2O60496 412 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 SNRNP200O75643 2136 aaKnown RBP11.6□□□□□ -0.55
CDH3-202ENST00000429102 RFPL3O75679 317 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 CFDP00746 253 aaPredicted RBP11.6□□□□□ -0.55
CDH3-202ENST00000429102 HPXP02790 462 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 RPN2P04844 631 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 FBXO45P0C2W1 286 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 HNRNPCL4P0DMR1 293 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 MYOGP15173 224 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 ARHGDIBP52566 201 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 KCNAB1Q14722 419 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 HNRNPA1L2Q32P51 320 aaKnown RBP11.6□□□□□ -0.55
CDH3-202ENST00000429102 BICRALQ6AI39 1079 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 ABHD17CQ6PCB6 329 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 ZNF620Q6ZNG0 422 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 RASSF6Q6ZTQ3 369 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 PLCZ1Q86YW0 608 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 RASGRP3Q8IV61 690 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 SFTPA2Q8IWL1 248 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 ZNF680Q8NEM1 530 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 DIO2Q92813 273 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 PPP1R16AQ96I34 528 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 ZNF514Q96K75 400 aaPredicted RBP11.6□□□□□ -0.55
CDH3-202ENST00000429102 HYLS1Q96M11 299 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 PINK1Q9BXM7 581 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 MCOLN1Q9GZU1 580 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 MYEF2Q9P2K5 600 aaKnown RBP11.6□□□□□ -0.55
CDH3-202ENST00000429102 RCE1Q9Y256 329 aa11.6□□□□□ -0.55
CDH3-202ENST00000429102 ARRDC5A6NEK1 342 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 UNC119BA6NIH7 251 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 LEUTXA8MZ59 168 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 H0Y8X5 98 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 STK25O00506 426 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 ANXA11P50995 505 aaKnown RBP11.59□□□□□ -0.55
CDH3-202ENST00000429102 ELAVL3Q14576 367 aaKnown RBP11.59□□□□□ -0.55
CDH3-202ENST00000429102 CLPPQ16740 277 aaPredicted RBP11.59□□□□□ -0.55
CDH3-202ENST00000429102 MRPL2Q5T653 305 aaKnown RBP11.59□□□□□ -0.55
CDH3-202ENST00000429102 COX18Q8N8Q8 333 aa11.59□□□□□ -0.55
CDH3-202ENST00000429102 ERMAPQ96PL5 475 aaPredicted RBP11.59□□□□□ -0.55
CDH3-202ENST00000429102 MARVELD1Q9BSK0 173 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms