RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 STACQ99469 402 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 GPR87Q9BY21 358 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 TSPAN10Q9H1Z9 355 aaPredicted RBP8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 DEPPQ9NTK1 212 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 ADPRHL2Q9NX46 363 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 AASSQ9UDR5 926 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 FBXL2Q9UKC9 423 aa8.71□□□□□ -1.01
HMGCLL1-206ENST00000428842 CDHR4A6H8M9 788 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF701M0R085 212 aaPredicted RBP8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 HCRTR2O43614 444 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 ASNA1O43681 348 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 PIP5K1CO60331 668 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 NUDT14O95848 222 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 PDGFAP04085 211 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 SEMG1P04279 462 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 GNAO1P09471 354 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 RAB40ALP0C0E4 278 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 HPGDP15428 266 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 DRD5P21918 477 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 EPHA2P29317 976 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF117Q03924 483 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 C19orf57Q0VDD7 668 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZIK1Q3SY52 487 aaPredicted RBP8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 ERICH5Q6P6B1 374 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 Q6ZPB1 254 aaPredicted RBP8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 GALNT5Q7Z7M9 940 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 NKAIN4Q8IVV8 208 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 SPACA3Q8IXA5 215 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 TMEM156Q8N614 296 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 POGLUT1Q8NBL1 392 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 CHDHQ8NE62 594 aaPredicted RBP8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 ATP6V1C2Q8NEY4 427 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF607Q96SK3 696 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 TMEM185BQ9H7F4 350 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 SELENONQ9NZV5 590 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 RPH3AQ9Y2J0 694 aaPredicted RBP8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 DCHS2Q6V1P9 2916 aa8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 MAP1AP78559 2803 aaPredicted RBP8.71□□□□□ -1.02
HMGCLL1-206ENST00000428842 TACC2O95359 2948 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 A0A0G2JPF8 293 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 HNRNPCL2B2RXH8 293 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 HNRNPCL3B7ZW38 293 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 NPIPB9F8W1W9 429 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 DXOO77932 396 aaKnown RBP8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 ANGPTL1O95841 491 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 WDPCPO95876 746 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 CSTAP01040 98 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 FABP3P05413 133 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 RFPL3SP0C7P2 107 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 HNRNPCL4P0DMR1 293 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 EVI2BP34910 448 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 CDH15P55291 814 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 PMP22Q01453 160 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 RBBP4Q09028 425 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 FAM98BQ52LJ0 330 aaKnown RBP8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 DHRS4L2Q6PKH6 230 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 USP51Q70EK9 711 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 PEX5LQ8IYB4 626 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 GALNT16Q8N428 558 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 TMEM255BQ8WV15 326 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 PROX1Q92786 737 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 EXTL1Q92935 676 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 RAD21L1Q9H4I0 556 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 MTHFD2LQ9H903 347 aaPredicted RBP8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 IL1RAPQ9NPH3 570 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 DNAJB12Q9NXW2 375 aaKnown RBP8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 GPR83Q9NYM4 423 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 KLRF1Q9NZS2 232 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 SAMD4AQ9UPU9 718 aaKnown RBP8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 CHCHD2Q9Y6H1 151 aaPredicted RBP8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 CENPEQ02224 2701 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 M0R129 80 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 GNGT2O14610 69 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 IL33O95760 270 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 LGI1O95970 557 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 RAP2AP10114 183 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 NID1P14543 1247 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 CD96P40200 585 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 RGS8P57771 180 aaPredicted RBP8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 SPIBQ01892 262 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZBED5Q49AG3 693 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 KLHL26Q53HC5 615 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 FGD3Q5JSP0 725 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 ENTPD8Q5MY95 495 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 C1QL3Q5VWW1 255 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 TTC33Q6PID6 262 aaPredicted RBP8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 CCDC80Q76M96 950 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 B4GALNT2Q8NHY0 566 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 BBS10Q8TAM1 723 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF354BQ96LW1 612 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 UBL7Q96S82 380 aaPredicted RBP8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 GPA33Q99795 319 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 PELOQ9BRX2 385 aaKnown RBP8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 MFRPQ9BY79 579 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 PROK2Q9HC23 129 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 BCL2L10Q9HD36 194 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 MMP25Q9NPA2 562 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 A4GNTQ9UNA3 340 aa8.7□□□□□ -1.02
HMGCLL1-206ENST00000428842 PPIEQ9UNP9 301 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms