RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 OR4D11Q8NGI4 311 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 ZNF563Q8TA94 476 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 C9orf43Q8TAL5 461 aaPredicted RBP7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 RNF217Q8TC41 542 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 RNF138Q8WVD3 245 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 SNRNP27Q8WVK2 155 aaKnown RBP7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 HAS2Q92819 552 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 SLC35B4Q969S0 331 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 SLCO4A1Q96BD0 722 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 MCHR1Q99705 422 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 FAM173AQ9BQD7 235 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 WFDC6Q9BQY6 131 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 ZNF559Q9BR84 538 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 RSPO3Q9BXY4 272 aaPredicted RBP7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 LAT2Q9GZY6 243 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 EVA1AQ9H8M9 152 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 S100A14Q9HCY8 104 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 IL1RAPQ9NPH3 570 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 EXOSC3Q9NQT5 275 aaKnown RBP7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 CTPS2Q9NRF8 586 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 CCM2LQ9NUG4 571 aaPredicted RBP7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 SELENONQ9NZV5 590 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 NDUFAF4Q9P032 175 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 MED11Q9P086 117 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 RPS6KB2Q9UBS0 482 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 B4GALT7Q9UBV7 327 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 DKKL1Q9UK85 242 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 BOKQ9UMX3 212 aaPredicted RBP7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 TP53TG5Q9Y2B4 290 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 NTNG1Q9Y2I2 539 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 AP4S1Q9Y587 144 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 HRH3Q9Y5N1 445 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 ANKRD11Q6UB99 2663 aaPredicted RBP7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 WDFY3Q8IZQ1 3526 aa7.22□□□□□ -1.25
HMGA1P4-201ENST00000428643 IGLV3-32A0A0A0MS00 114 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 ANKUB1A6NFN9 424 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 LRRC3CA6NJW4 275 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 H3BNX3 289 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 KLRC4-KLRK1H3BQV0 150 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 GNGT2O14610 69 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 ADAM10O14672 748 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 SNPHO15079 494 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 PEX1O43933 1283 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 FMO6PO60774 539 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 TRIM3O75382 744 aaPredicted RBP7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 BAG2O95816 211 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 LDLRP01130 860 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 PDGFAP04085 211 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 PGCP20142 388 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 CNR1P21554 472 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 HTR2AP28223 471 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 RFC3P40938 356 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 MAGEA2P43356 314 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 CD97P48960 835 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 MEOX1P50221 254 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 P2RX1P51575 399 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 ZNF136P52737 540 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 SPIBQ01892 262 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 EPS8Q12929 822 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 FOXD4Q12950 439 aaPredicted RBP7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 CBFBQ13951 182 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 GANABQ14697 944 aaKnown RBP7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 QPRTQ15274 297 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 TOMM20Q15388 145 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 INPP5JQ15735 1006 aaPredicted RBP7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 FGD3Q5JSP0 725 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 TIGD3Q6B0B8 471 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 AAGABQ6PD74 315 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 C19orf48Q6RUI8 117 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 ASB18Q6ZVZ8 466 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 GALNTL5Q7Z4T8 443 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 PLCZ1Q86YW0 608 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 SULF2Q8IWU5 870 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 WDSUB1Q8N9V3 476 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 OR2M7Q8NG81 312 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 OR1J4Q8NGS1 313 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 OR5W2Q8NH69 310 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 ABHD17AQ96GS6 310 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 TMEM41AQ96HV5 264 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 PRRC1Q96M27 445 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 ZNF300Q96RE9 604 aaPredicted RBP7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 ZNF347Q96SE7 839 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 PIP5K1AQ99755 562 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 PRR14Q9BWN1 585 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 MFRPQ9BY79 579 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 TRIM2Q9C040 744 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 AMBRA1Q9C0C7 1298 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 DSN1Q9H410 356 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 PTGES2Q9H7Z7 377 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 TMEM27Q9HBJ8 222 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 PROK2Q9HC23 129 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 DEPPQ9NTK1 212 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 ARMC1Q9NVT9 282 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 TUBA8Q9NY65 449 aaPredicted RBP7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 RHCGQ9UBD6 479 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 FBXL2Q9UKC9 423 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 ICAM5Q9UMF0 924 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 C15orf41Q9Y2V0 281 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 TESMINQ9Y4I5 508 aa7.21□□□□□ -1.26
HMGA1P4-201ENST00000428643 PCDHGB7Q9Y5F8 929 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms