RNA–Protein interactions for RNA: ENST00000427415.1

SDHAP1-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4 BASIC

Gene SDHAP1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-204ENST00000427415 ARAFP10398 606 aa20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 PEPDP12955 493 aa20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 CPN1P15169 458 aa20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 IL7RP16871 459 aa20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 POU3F2P20265 443 aaPredicted RBP20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 SMSP52788 366 aa20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 MTPNP58546 118 aa20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 SKP2Q13309 424 aa20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 LIN52Q52LA3 116 aa20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 HMGN2P46Q86SG4 172 aa20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 GTPBP8Q8N3Z3 284 aaPredicted RBP20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 MAL2Q969L2 176 aa20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 ZG16BQ96DA0 208 aa20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 ARSGQ96EG1 525 aa20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 SH3GL1Q99961 368 aa20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 CCDC106Q9BWC9 280 aa20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 TMEM38AQ9H6F2 299 aa20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 GID8Q9NWU2 228 aa20.47■□□□□ 0.87
SDHAP1-204ENST00000427415 CACNA1CQ13936 2221 aa20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 NID1P14543 1247 aa20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 PGM1P36871 562 aa20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 EIF1P41567 113 aaKnown RBP20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 LHX2P50458 406 aa20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 CDK6Q00534 326 aa20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 CAPRIN1Q14444 709 aaKnown RBP20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 BCL2A1Q16548 175 aa20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 CYP51A1Q16850 503 aa20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 TMEM44Q2T9K0 475 aa20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 RPS26P11Q5JNZ5 115 aaPredicted RBP20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 REEP3Q6NUK4 255 aa20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 FAM71CQ8NEG0 241 aa20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 OR5M1Q8NGP8 315 aa20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 NFKBIDQ8NI38 313 aa20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 LRRC58Q96CX6 371 aa20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 DOCK7Q96N67 2140 aa20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 BCL2L10Q9HD36 194 aa20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 EXOSC3Q9NQT5 275 aaKnown RBP20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 ARL2BPQ9Y2Y0 163 aa20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 GPC6Q9Y625 555 aaPredicted RBP20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 USP9YO00507 2555 aaPredicted RBP20.46■□□□□ 0.87
SDHAP1-204ENST00000427415 H3BML4 177 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 LINGO3P0C6S8 592 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 ZNF708P17019 499 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 PGCP20142 388 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 STARP49675 285 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 LARS2Q15031 903 aaKnown RBP20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 ACSF3Q4G176 576 aaPredicted RBP20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 PIGWQ7Z7B1 504 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 C10orf111Q8N326 155 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 MEIOBQ8N635 442 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 POU5F2Q8N7G0 328 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 OR8J3Q8NGG0 315 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 OR52P1PQ8NH57 321 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 GPR119Q8TDV5 335 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 RCN3Q96D15 328 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 MYLK2Q9H1R3 596 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 IFT52Q9Y366 437 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 ZNF337Q9Y3M9 751 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 FAM215AQ9Y5M1 114 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 AP4B1Q9Y6B7 739 aa20.45■□□□□ 0.86
SDHAP1-204ENST00000427415 THBS1P07996 1170 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 RNF224P0DH78 156 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 COX4I1P13073 169 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 SLC6A2P23975 617 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 ELK4P28324 431 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 SLC6A8P48029 635 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 CLDN18P56856 261 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 ADORA2A-AS1P86434 159 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 SRYQ05066 204 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 FOXF1Q12946 379 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 SCARB2Q14108 478 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 ZSWIM7Q19AV6 140 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 KRT73Q86Y46 540 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 RPRMLQ8N4K4 120 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 ZNF808Q8N4W9 903 aaPredicted RBP20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 C11orf65Q8NCR3 313 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 ZPLD1Q8TCW7 415 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 RND1Q92730 232 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 RNF145Q96MT1 663 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 KLHDC3Q9BQ90 382 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 TTYH2Q9BSA4 534 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 ARMC7Q9H6L4 198 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 ZNF232Q9UNY5 417 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 ANGPT4Q9Y264 503 aa20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 ZNF443Q9Y2A4 671 aaPredicted RBP20.44■□□□□ 0.86
SDHAP1-204ENST00000427415 CLDN24A6NM45 220 aa20.43■□□□□ 0.86
SDHAP1-204ENST00000427415 SHISA8B8ZZ34 492 aa20.43■□□□□ 0.86
SDHAP1-204ENST00000427415 FXYD1O00168 92 aa20.43■□□□□ 0.86
SDHAP1-204ENST00000427415 DNAJA2O60884 412 aa20.43■□□□□ 0.86
SDHAP1-204ENST00000427415 PGM3O95394 542 aa20.43■□□□□ 0.86
SDHAP1-204ENST00000427415 ETS2P15036 469 aa20.43■□□□□ 0.86
SDHAP1-204ENST00000427415 ME2P23368 584 aa20.43■□□□□ 0.86
SDHAP1-204ENST00000427415 ADH6P28332 368 aa20.43■□□□□ 0.86
SDHAP1-204ENST00000427415 EEFSECP57772 596 aaKnown RBP20.43■□□□□ 0.86
SDHAP1-204ENST00000427415 RBBP4Q09028 425 aa20.43■□□□□ 0.86
SDHAP1-204ENST00000427415 SELPLGQ14242 412 aa20.43■□□□□ 0.86
SDHAP1-204ENST00000427415 QPRTQ15274 297 aa20.43■□□□□ 0.86
SDHAP1-204ENST00000427415 MRPL2Q5T653 305 aaKnown RBP20.43■□□□□ 0.86
SDHAP1-204ENST00000427415 RNF220Q5VTB9 566 aa20.43■□□□□ 0.86
SDHAP1-204ENST00000427415 RTL6Q6ICC9 239 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms