RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 ZCCHC7Q8N3Z6 543 aaKnown RBP5.04□□□□□ -1.6
C9orf3-205ENST00000427193 Q8N9G6 341 aaPredicted RBP5.04□□□□□ -1.6
C9orf3-205ENST00000427193 TRPV3Q8NET8 790 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 OR2L5Q8NG80 312 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 AGR3Q8TD06 166 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 SELENOMQ8WWX9 145 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 NCSTNQ92542 709 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 C10orf90Q96M02 699 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 TEFMQ96QE5 360 aaKnown RBP5.04□□□□□ -1.6
C9orf3-205ENST00000427193 HBEGFQ99075 208 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 MTERF1Q99551 399 aaKnown RBP5.04□□□□□ -1.6
C9orf3-205ENST00000427193 ELAC2Q9BQ52 826 aaKnown RBP5.04□□□□□ -1.6
C9orf3-205ENST00000427193 ELOVL6Q9H5J4 265 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 CLK4Q9HAZ1 481 aaKnown RBP5.04□□□□□ -1.6
C9orf3-205ENST00000427193 TCF7L2Q9NQB0 619 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 SAR1AQ9NR31 198 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 ABCF3Q9NUQ8 709 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 AIG1Q9NVV5 245 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 C1orf109Q9NX04 203 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 TAS2R7Q9NYW3 318 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 VPS29Q9UBQ0 182 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 GIMAP2Q9UG22 337 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 DLGAP4Q9Y2H0 992 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 WBP11Q9Y2W2 641 aaKnown RBP5.04□□□□□ -1.6
C9orf3-205ENST00000427193 ARL2BPQ9Y2Y0 163 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 MRPS2Q9Y399 296 aaKnown RBP5.04□□□□□ -1.6
C9orf3-205ENST00000427193 TMED5Q9Y3A6 229 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 ANGPTL3Q9Y5C1 460 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 CLDN16Q9Y5I7 305 aa5.04□□□□□ -1.6
C9orf3-205ENST00000427193 KIF26BQ2KJY2 2108 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 MDC1Q14676 2089 aaKnown RBP5.03□□□□□ -1.6
C9orf3-205ENST00000427193 IGLV3-12A0A075B6K2 115 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 A0A0G2JND7 137 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 ATP6AP2A0A1C7CYW4 349 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 AGAP5A6NIR3 686 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 B4E171 279 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 ZW10O43264 779 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 ASNA1O43681 348 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 OR1F1O43749 312 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 TBX19O60806 448 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 EEDO75530 441 aaKnown RBP5.03□□□□□ -1.6
C9orf3-205ENST00000427193 SKAP2O75563 359 aaPredicted RBP5.03□□□□□ -1.6
C9orf3-205ENST00000427193 ATP6AP2O75787 350 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 TROVE2P10155 538 aaKnown RBP eCLIP5.03□□□□□ -1.6
C9orf3-205ENST00000427193 FGF5P12034 268 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 BCKDHAP12694 445 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 DAOP14920 347 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 FOLR1P15328 257 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 LBPP18428 481 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 SDC1P18827 310 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 CDH3P22223 829 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 GPX3P22352 226 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 JAK1P23458 1154 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 ATP5A1P25705 553 aaKnown RBP5.03□□□□□ -1.6
C9orf3-205ENST00000427193 PTPN6P29350 595 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 HMOX2P30519 316 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 TSPAN7P41732 249 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 CDH12P55289 794 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 IFT88Q13099 833 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 CEBPEQ15744 281 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 HIST2H2ACQ16777 129 aaPredicted RBP5.03□□□□□ -1.6
C9orf3-205ENST00000427193 ISXQ2M1V0 245 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 HKDC1Q2TB90 917 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 AP5B1Q2VPB7 878 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 KRTAP24-1Q3LI83 254 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 AMZ1Q400G9 498 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 SPIN4Q56A73 249 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 GKAP1Q5VSY0 366 aaPredicted RBP5.03□□□□□ -1.6
C9orf3-205ENST00000427193 GARNL3Q5VVW2 1013 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 HIST2H2AA3Q6FI13 130 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 IRGCQ6NXR0 463 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 SCIMPQ6UWF3 145 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 FAM92BQ6ZTR7 304 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 COMMD6Q7Z4G1 85 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 SPATA19Q7Z5L4 167 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 CPLX4Q7Z7G2 160 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 ASPGQ86U10 573 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 RFLNBQ8N5W9 214 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 AMER3Q8N944 861 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 OR8K5Q8NH50 307 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 OR1L3Q8NH93 324 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 UTP15Q8TED0 518 aaKnown RBP5.03□□□□□ -1.6
C9orf3-205ENST00000427193 SSC4DQ8WTU2 575 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 SLC13A3Q8WWT9 602 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 MUL1Q969V5 352 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 ATP6V1E2Q96A05 226 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 TEX37Q96LM6 180 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 PPP3R2Q96LZ3 170 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 TGM7Q96PF1 710 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 F2RL3Q96RI0 385 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 GFM1Q96RP9 751 aaKnown RBP5.03□□□□□ -1.6
C9orf3-205ENST00000427193 SERPINI1Q99574 410 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 TBCDQ9BTW9 1192 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 CCDC106Q9BWC9 280 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 MRPL1Q9BYD6 325 aaKnown RBP5.03□□□□□ -1.6
C9orf3-205ENST00000427193 NMUR2Q9GZQ4 415 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 NSRP1Q9H0G5 558 aaKnown RBP5.03□□□□□ -1.6
C9orf3-205ENST00000427193 OR51B5Q9H339 312 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 LRTM1Q9HBL6 345 aa5.03□□□□□ -1.6
C9orf3-205ENST00000427193 PFDN4Q9NQP4 134 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms