RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 NUP107P57740 925 aa15.93■□□□□ 0.14
FN1-208ENST00000426059 CSRP2Q16527 193 aa15.93■□□□□ 0.14
FN1-208ENST00000426059 ALG10BQ5I7T1 473 aa15.93■□□□□ 0.14
FN1-208ENST00000426059 FNDC7Q5VTL7 733 aa15.93■□□□□ 0.14
FN1-208ENST00000426059 LINC00471Q8N535 108 aa15.93■□□□□ 0.14
FN1-208ENST00000426059 ZNF527Q8NB42 609 aa15.93■□□□□ 0.14
FN1-208ENST00000426059 GNPDA2Q8TDQ7 276 aa15.93■□□□□ 0.14
FN1-208ENST00000426059 TMEM239Q8WW34 195 aa15.93■□□□□ 0.14
FN1-208ENST00000426059 LRFN5Q96NI6 719 aa15.93■□□□□ 0.14
FN1-208ENST00000426059 CDC6Q99741 560 aa15.93■□□□□ 0.14
FN1-208ENST00000426059 DPH1Q9BZG8 443 aa15.93■□□□□ 0.14
FN1-208ENST00000426059 WDR54Q9H977 334 aa15.93■□□□□ 0.14
FN1-208ENST00000426059 MRTO4Q9UKD2 239 aaKnown RBP15.93■□□□□ 0.14
FN1-208ENST00000426059 SDK2Q58EX2 2172 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 TMEM200CA6NKL6 621 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 TO15178 435 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 TBXA2RP21731 343 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 NR1H2P55055 460 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 SLC26A5P58743 744 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 E2F1Q01094 437 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 CLEC12AQ5QGZ9 265 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 CDCP2Q5VXM1 449 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 MARCH9Q86YJ5 346 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 SLC34A3Q8N130 599 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 OR8D4Q8NGM9 314 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 RHOXF1Q8NHV9 184 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 CCDC90BQ9GZT6 254 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 ZFHX2Q9C0A1 2572 aaPredicted RBP15.92■□□□□ 0.14
FN1-208ENST00000426059 AHCTF1Q8WYP5 2266 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 GTPBP1O00178 669 aaKnown RBP15.92■□□□□ 0.14
FN1-208ENST00000426059 NGFRP08138 427 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 UBL4AP11441 157 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 NUBP1P53384 320 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 TSPAN31Q12999 210 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 TRIP6Q15654 476 aaKnown RBP15.92■□□□□ 0.14
FN1-208ENST00000426059 NEDD8Q15843 81 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 C3orf38Q5JPI3 329 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 HES3Q5TGS1 186 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 ACSM5Q6NUN0 579 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 ZNF613Q6PF04 617 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 KCTD8Q6ZWB6 473 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 ZNF550Q7Z398 422 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 BCDIN3DQ7Z5W3 292 aaKnown RBP15.92■□□□□ 0.14
FN1-208ENST00000426059 HSPBAP1Q96EW2 488 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 VMP1Q96GC9 406 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 HOXD1Q9GZZ0 328 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 MEPEQ9NQ76 525 aaPredicted RBP15.92■□□□□ 0.14
FN1-208ENST00000426059 ENOPH1Q9UHY7 261 aa15.92■□□□□ 0.14
FN1-208ENST00000426059 C9orf172C9J069 976 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 IFI30P13284 250 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 GABRB1P18505 474 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 MAKP20794 623 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 IFNGR2P38484 337 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 CDC42P60953 191 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 COX10Q12887 443 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 GINS1Q14691 196 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 CD300LDQ6UXZ3 194 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 CMIPQ8IY22 773 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 POGLUT1Q8NBL1 392 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 ZNF540Q8NDQ6 660 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 COL25A1Q9BXS0 654 aaPredicted RBP15.91■□□□□ 0.14
FN1-208ENST00000426059 FOXJ2Q9P0K8 574 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 ERVK-18Q9QC07 812 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 C19orf25Q9UFG5 118 aaPredicted RBP15.91■□□□□ 0.14
FN1-208ENST00000426059 SLC35A3Q9Y2D2 325 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 NPFFR2Q9Y5X5 522 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 MPDZO75970 2070 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 MUC6Q6W4X9 2439 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 C2orf72A6NCS6 295 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 SCO2O43819 266 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 FAM20BO75063 409 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 FBXW4P57775 412 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 TUBA4AP68366 448 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 SKP2Q13309 424 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 PCOLCEQ15113 449 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 BTBD16Q32M84 506 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 PTCHD4Q6ZW05 846 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 LSMEM1Q8N8F7 131 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 DEFB124Q8NES8 71 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 TAAR9Q96RI9 348 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 TRIM2Q9C040 744 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 POLR1BQ9H9Y6 1135 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 TVP23BQ9NYZ1 205 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 RPS6KB2Q9UBS0 482 aa15.91■□□□□ 0.14
FN1-208ENST00000426059 NXT1Q9UKK6 140 aaKnown RBP15.91■□□□□ 0.14
FN1-208ENST00000426059 RIF1Q5UIP0 2472 aaKnown RBP15.9■□□□□ 0.14
FN1-208ENST00000426059 TRIM64CA6NLI5 447 aa15.9■□□□□ 0.14
FN1-208ENST00000426059 PLD2O14939 933 aa15.9■□□□□ 0.14
FN1-208ENST00000426059 ZNF264O43296 627 aa15.9■□□□□ 0.14
FN1-208ENST00000426059 CHP2O43745 196 aa15.9■□□□□ 0.14
FN1-208ENST00000426059 CCDC159P0C7I6 412 aa15.9■□□□□ 0.14
FN1-208ENST00000426059 TCN2P20062 427 aa15.9■□□□□ 0.14
FN1-208ENST00000426059 MLLT10P55197 1068 aa15.9■□□□□ 0.14
FN1-208ENST00000426059 RAB15P59190 212 aa15.9■□□□□ 0.14
FN1-208ENST00000426059 ZNF773Q6PK81 442 aa15.9■□□□□ 0.14
FN1-208ENST00000426059 DEPDC7Q96QD5 511 aa15.9■□□□□ 0.14
FN1-208ENST00000426059 PADI1Q9ULC6 663 aa15.9■□□□□ 0.14
FN1-208ENST00000426059 PPIEQ9UNP9 301 aaKnown RBP15.9■□□□□ 0.14
FN1-208ENST00000426059 HS3ST3B1Q9Y662 390 aa15.9■□□□□ 0.14
FN1-208ENST00000426059 ASPMQ8IZT6 3477 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms