RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 DIDO1Q9BTC0 2240 aaKnown RBP16.7■□□□□ 0.26
HDAC6-205ENST00000423941 CLDN24A6NM45 220 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 THBS1P07996 1170 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 RNF224P0DH78 156 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 ZNF708P17019 499 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 ZNF17P17021 662 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 ACVR2AP27037 513 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 ADH6P28332 368 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 PRDX6P30041 224 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 PTGER4P35408 488 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 CLDN18P56856 261 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 MTPNP58546 118 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 RBBP4Q09028 425 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 CAPRIN1Q14444 709 aaKnown RBP16.69■□□□□ 0.26
HDAC6-205ENST00000423941 MMEL1Q495T6 779 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 GCNT6Q5T4J0 391 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 REEP3Q6NUK4 255 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 ENPP6Q6UWR7 440 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 ADGRE4PQ86SQ3 457 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 SERPINA11Q86U17 422 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 CALHM3Q86XJ0 350 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 GRAMD2AQ8IUY3 354 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 PEX5LQ8IYB4 626 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 MARVELD2Q8N4S9 558 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 POU5F2Q8N7G0 328 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 ZNF614Q8N883 585 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 OR5M9Q8NGP3 310 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 POC1BQ8TC44 478 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 ZPLD1Q8TCW7 415 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 CCDC120Q96HB5 630 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 UCN2Q96RP3 112 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 PIGQQ9BRB3 760 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 GPATCH1Q9BRR8 931 aaKnown RBP16.69■□□□□ 0.26
HDAC6-205ENST00000423941 SLC39A3Q9BRY0 314 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 THUMPD3Q9BV44 507 aaKnown RBP16.69■□□□□ 0.26
HDAC6-205ENST00000423941 TRIM8Q9BZR9 551 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 GID8Q9NWU2 228 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 RPH3AQ9Y2J0 694 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-205ENST00000423941 ZNF337Q9Y3M9 751 aa16.69■□□□□ 0.26
HDAC6-205ENST00000423941 CDHR4A6H8M9 788 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 TMEM247A6NEH6 219 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 FIGNL2A6NMB9 653 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 ADAM11O75078 769 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 AGFG2O95081 481 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 GCKP35557 465 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 STARP49675 285 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 RNF144AP50876 292 aaPredicted RBP16.68■□□□□ 0.26
HDAC6-205ENST00000423941 PER3P56645 1201 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 CLDN15P56746 228 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 EEF1A1P68104 462 aaKnown RBP16.68■□□□□ 0.26
HDAC6-205ENST00000423941 ADORA2A-AS1P86434 159 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 CDK6Q00534 326 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 TOMM34Q15785 309 aaPredicted RBP16.68■□□□□ 0.26
HDAC6-205ENST00000423941 ZSWIM7Q19AV6 140 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 RPS26P11Q5JNZ5 115 aaPredicted RBP16.68■□□□□ 0.26
HDAC6-205ENST00000423941 MTFR2Q6P444 385 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 HMGN2P46Q86SG4 172 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 EID3Q8N140 333 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 RPRMLQ8N4K4 120 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 OR52P1PQ8NH57 321 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 BBS10Q8TAM1 723 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 SSC4DQ8WTU2 575 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 CNOT9Q92600 299 aaKnown RBP16.68■□□□□ 0.26
HDAC6-205ENST00000423941 RCN3Q96D15 328 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 SFXN2Q96NB2 322 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 SH3GL1Q99961 368 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 DNAJB12Q9NXW2 375 aaKnown RBP16.68■□□□□ 0.26
HDAC6-205ENST00000423941 VDAC3Q9Y277 283 aa16.68■□□□□ 0.26
HDAC6-205ENST00000423941 GPC6Q9Y625 555 aaPredicted RBP16.68■□□□□ 0.26
HDAC6-205ENST00000423941 BAHCC1Q9P281 2608 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 FAAHO00519 579 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 EFNA2O43921 213 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 GCM2O75603 506 aaPredicted RBP16.67■□□□□ 0.26
HDAC6-205ENST00000423941 EPPINO95925 133 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 IL7RP16871 459 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 PRKCAP17252 672 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 SLC6A2P23975 617 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 EIF1P41567 113 aaKnown RBP16.67■□□□□ 0.26
HDAC6-205ENST00000423941 ZNF41P51814 821 aaPredicted RBP16.67■□□□□ 0.26
HDAC6-205ENST00000423941 PCBP3P57721 371 aaKnown RBP16.67■□□□□ 0.26
HDAC6-205ENST00000423941 RABL3Q5HYI8 236 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 MRPL2Q5T653 305 aaKnown RBP16.67■□□□□ 0.26
HDAC6-205ENST00000423941 RNF220Q5VTB9 566 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 RAET1LQ5VY80 246 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 ZNF585AQ6P3V2 769 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 HACD2Q6Y1H2 254 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 C3P1Q6ZMU1 363 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 VRK2Q86Y07 508 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 ZZZ3Q8IYH5 903 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 NFKBIDQ8NI38 313 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 WDR60Q8WVS4 1066 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 CMTM5Q96DZ9 223 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 TTYH2Q9BSA4 534 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 SPATA9Q9BWV2 254 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 SH3BGRL2Q9UJC5 107 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 IFT52Q9Y366 437 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 AP4B1Q9Y6B7 739 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 KIAA1549Q9HCM3 1950 aa16.67■□□□□ 0.26
HDAC6-205ENST00000423941 PCNX1Q96RV3 2341 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms