RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 CBLN3Q6UW01 205 aa19.66■□□□□ 0.74
ABCF3-202ENST00000421340 LINC00696Q6ZRV3 163 aa19.66■□□□□ 0.74
ABCF3-202ENST00000421340 OFCC1Q8IZS5 231 aa19.66■□□□□ 0.74
ABCF3-202ENST00000421340 SVOPLQ8N434 492 aa19.66■□□□□ 0.74
ABCF3-202ENST00000421340 PSD4Q8NDX1 1056 aa19.66■□□□□ 0.74
ABCF3-202ENST00000421340 FDCSPQ8NFU4 85 aa19.66■□□□□ 0.74
ABCF3-202ENST00000421340 SMAD5Q99717 465 aaKnown RBP19.66■□□□□ 0.74
ABCF3-202ENST00000421340 FNDC11Q9BVV2 318 aa19.66■□□□□ 0.74
ABCF3-202ENST00000421340 PROK2Q9HC23 129 aa19.66■□□□□ 0.74
ABCF3-202ENST00000421340 PPP4R1LQ9P1A2 415 aa19.66■□□□□ 0.74
ABCF3-202ENST00000421340 RAXQ9Y2V3 346 aa19.66■□□□□ 0.74
ABCF3-202ENST00000421340 SPTBN2O15020 2390 aa19.66■□□□□ 0.74
ABCF3-202ENST00000421340 AKAP13Q12802 2813 aa19.66■□□□□ 0.74
ABCF3-202ENST00000421340 TRAPPC13A5PLN9 417 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 TMEM8BA6NDV4 472 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 OIP5O43482 229 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 ADAM11O75078 769 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 CYP7B1O75881 506 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 H1F0P07305 194 aaKnown RBP19.65■□□□□ 0.74
ABCF3-202ENST00000421340 PGCP20142 388 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 CNR1P21554 472 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 HTR2AP28223 471 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 RRM2P31350 389 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 LIMS1P48059 325 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 ARHGDIAP52565 204 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 TAS2R41P59536 307 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 COPZ1P61923 177 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 HOXC5Q00444 222 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 OR1C1Q15619 314 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 NDUFAF6Q330K2 333 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 BICRALQ6AI39 1079 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 UNQ6494/PRO21346Q6UXR6 183 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 PLEKHM3Q6ZWE6 761 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 MDGA2Q7Z553 956 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 PACS2Q86VP3 889 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 OR5K1Q8NHB7 308 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 ADAMTS16Q8TE57 1224 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 TMEM41AQ96HV5 264 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 DCBLD2Q96PD2 775 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 OSBPL10Q9BXB5 764 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 SEMA6AQ9H2E6 1030 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 GALNT9Q9HCQ5 603 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 TESMINQ9Y4I5 508 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 PCDHGA9Q9Y5G4 932 aaKnown RBP19.65■□□□□ 0.74
ABCF3-202ENST00000421340 LYVE1Q9Y5Y7 322 aa19.65■□□□□ 0.74
ABCF3-202ENST00000421340 ANKUB1A6NFN9 424 aa19.64■□□□□ 0.73
ABCF3-202ENST00000421340 TNFRSF11BO00300 401 aa19.64■□□□□ 0.73
ABCF3-202ENST00000421340 TRIM3O75382 744 aaPredicted RBP19.64■□□□□ 0.73
ABCF3-202ENST00000421340 GADD45GO95257 159 aa19.64■□□□□ 0.73
ABCF3-202ENST00000421340 FPR1P21462 350 aa19.64■□□□□ 0.73
ABCF3-202ENST00000421340 DLX5P56178 289 aa19.64■□□□□ 0.73
ABCF3-202ENST00000421340 SPIBQ01892 262 aa19.64■□□□□ 0.73
ABCF3-202ENST00000421340 COL28A1Q2UY09 1125 aa19.64■□□□□ 0.73
ABCF3-202ENST00000421340 SWT1Q5T5J6 900 aaKnown RBP19.64■□□□□ 0.73
ABCF3-202ENST00000421340 WBP2NLQ6ICG8 309 aa19.64■□□□□ 0.73
ABCF3-202ENST00000421340 SHQ1Q6PI26 577 aaKnown RBP19.64■□□□□ 0.73
ABCF3-202ENST00000421340 TSPYL5Q86VY4 417 aaPredicted RBP19.64■□□□□ 0.73
ABCF3-202ENST00000421340 HIPK1Q86Z02 1210 aa19.64■□□□□ 0.73
ABCF3-202ENST00000421340 FADS6Q8N9I5 356 aa19.64■□□□□ 0.73
ABCF3-202ENST00000421340 MDS2Q8NDY4 140 aa19.64■□□□□ 0.73
ABCF3-202ENST00000421340 OR4C15Q8NGM1 316 aa19.64■□□□□ 0.73
ABCF3-202ENST00000421340 GPR119Q8TDV5 335 aa19.64■□□□□ 0.73
ABCF3-202ENST00000421340 DNAJA4Q8WW22 397 aaPredicted RBP19.64■□□□□ 0.73
ABCF3-202ENST00000421340 PRR14Q9BWN1 585 aa19.64■□□□□ 0.73
ABCF3-202ENST00000421340 C8orf4Q9NR00 106 aa19.64■□□□□ 0.73
ABCF3-202ENST00000421340 ANKRD10Q9NXR5 420 aa19.64■□□□□ 0.73
ABCF3-202ENST00000421340 SAMHD1Q9Y3Z3 626 aaKnown RBP19.64■□□□□ 0.73
ABCF3-202ENST00000421340 A0A0B4J2E0 115 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 A0A1B0GX12 115 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 MED19A0JLT2 244 aaPredicted RBP19.63■□□□□ 0.73
ABCF3-202ENST00000421340 CPSF4LA6NMK7 179 aaKnown RBP19.63■□□□□ 0.73
ABCF3-202ENST00000421340 C1QTNF9BB2RNN3 333 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 SNPHO15079 494 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 PEX1O43933 1283 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 C1QTNF9P0C862 333 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 CDH12P55289 794 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 RAPSNQ13702 412 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 GANABQ14697 944 aaKnown RBP19.63■□□□□ 0.73
ABCF3-202ENST00000421340 TRAM2Q15035 370 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 TRIP10Q15642 601 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 OGFRL1Q5TC84 451 aaPredicted RBP19.63■□□□□ 0.73
ABCF3-202ENST00000421340 SPINK14Q6IE38 97 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 ULK3Q6PHR2 472 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 IGFL3Q6UXB1 125 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 GDF7Q7Z4P5 450 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 PLCZ1Q86YW0 608 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 ZDHHC13Q8IUH4 622 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 LINC00471Q8N535 108 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 TMCO5AQ8N6Q1 288 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 WDSUB1Q8N9V3 476 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 CATSPER1Q8NEC5 780 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 SLC41A3Q96GZ6 507 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 SH3YL1Q96HL8 342 aaPredicted RBP19.63■□□□□ 0.73
ABCF3-202ENST00000421340 FUZQ9BT04 418 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 C9orf16Q9BUW7 83 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 C12orf10Q9HB07 376 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 VNN3Q9NY84 501 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 PLA2G3Q9NZ20 509 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 PCDHGB7Q9Y5F8 929 aa19.63■□□□□ 0.73
ABCF3-202ENST00000421340 G3V2T6 193 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms