RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 EIF3FO00303 357 aaPredicted RBP11.62□□□□□ -0.55
CLCN4-203ENST00000421085 SYNGR4O95473 234 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 ARAFP10398 606 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 ACY1Q03154 408 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 KDELC1Q6UW63 502 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 PGAP1Q75T13 922 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 LRIG1Q96JA1 1093 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 PAAF1Q9BRP4 392 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 UQCC2Q9BRT2 126 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 Q9Y3F1 56 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 BACE2Q9Y5Z0 518 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 TRAV27A0A087WT01 109 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 A6NLC8 198 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 TP53I11O14683 189 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 GPR155Q7Z3F1 870 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 OR4M1Q8NGD0 313 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 KCNIP1Q9NZI2 227 aa11.62□□□□□ -0.55
CLCN4-203ENST00000421085 GOLGA4Q13439 2230 aaKnown RBP11.61□□□□□ -0.55
CLCN4-203ENST00000421085 I6L893 689 aaPredicted RBP11.61□□□□□ -0.55
CLCN4-203ENST00000421085 P2RX6O15547 441 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 IL1RNP18510 177 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 APEX1P27695 318 aaKnown RBP11.61□□□□□ -0.55
CLCN4-203ENST00000421085 SLC22A25Q6T423 547 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 TECPR1Q7Z6L1 1165 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 BPIFB2Q8N4F0 458 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 PEX11GQ96HA9 241 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 NTMT1Q9BV86 223 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 OR52D1Q9H346 318 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 SERTAD4Q9NUC0 356 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 PGAP2Q9UHJ9 254 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 SLCO3A1Q9UIG8 710 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 PUS1Q9Y606 427 aaKnown RBP eCLIP11.61□□□□□ -0.55
CLCN4-203ENST00000421085 K7EPK0 472 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 SLC43A1O75387 559 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 GASTP01350 101 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 SCG5P05408 212 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 SNRPBP14678 240 aaKnown RBP11.61□□□□□ -0.55
CLCN4-203ENST00000421085 MSR1P21757 451 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 POLR2HP52434 150 aaKnown RBP11.61□□□□□ -0.55
CLCN4-203ENST00000421085 UBE2KP61086 200 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 PSPHP78330 225 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 GAB1Q13480 694 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 DUSP7Q16829 419 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 DLK2Q6UY11 383 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 FAM83HQ6ZRV2 1179 aaPredicted RBP11.61□□□□□ -0.55
CLCN4-203ENST00000421085 FAM71E2Q8N5Q1 922 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 PXT1Q8NFP0 134 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 MDGA1Q8NFP4 955 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 BPIFA2Q96DR5 249 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 SDSLQ96GA7 329 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 PELI2Q9HAT8 420 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 TREX1Q9NSU2 369 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 TMPRSS11EQ9UL52 423 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 NPIPA5A0A0B4J1W7 369 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 NPIPA7E9PJI5 369 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 TP53P04637 393 aaPredicted RBP11.61□□□□□ -0.55
CLCN4-203ENST00000421085 NPIPA8P0DM63 369 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 TPMTP51580 245 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 CLDN6P56747 220 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 DLX2Q07687 328 aaPredicted RBP11.61□□□□□ -0.55
CLCN4-203ENST00000421085 RBMS2Q15434 407 aaKnown RBP11.61□□□□□ -0.55
CLCN4-203ENST00000421085 PGGHGQ32M88 737 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 UNQ6126/PRO20091Q6UXV3 157 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 RETREG3Q86VR2 466 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 SULF2Q8IWU5 870 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 HAVCR2Q8TDQ0 301 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 HHIPL1Q96JK4 782 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 SLC19A3Q9BZV2 496 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 EGLN3Q9H6Z9 239 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 INPP5EQ9NRR6 644 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 GNG13Q9P2W3 67 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 KLK4Q9Y5K2 254 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 FAM208AQ9UK61 1670 aaKnown RBP11.61□□□□□ -0.55
CLCN4-203ENST00000421085 A0A1W2PP55 124 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 ZNF840PA6NDX5 716 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 IGLON5A6NGN9 336 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 GGT3PA6NGU5 568 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 SMIM18P0DKX4 95 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 GDNFP39905 211 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 PLK5Q496M5 336 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 RNF128Q8TEB7 428 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 PELOQ9BRX2 385 aaKnown RBP11.61□□□□□ -0.55
CLCN4-203ENST00000421085 DNAJC5Q9H3Z4 198 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 IL26Q9NPH9 171 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 PCYT1BQ9Y5K3 369 aaPredicted RBP11.61□□□□□ -0.55
CLCN4-203ENST00000421085 ANTXRLA6NF34 631 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 SDC3O75056 442 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 RAB40ALP0C0E4 278 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 PNMTP11086 282 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 C6P13671 934 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 FBLP22087 321 aaKnown RBP11.61□□□□□ -0.55
CLCN4-203ENST00000421085 RAET1LQ5VY80 246 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 SLC46A3Q7Z3Q1 461 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 OR6V1Q8N148 313 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 PRR18Q8N4B5 295 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 DNAAF1Q8NEP3 725 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 RAB40AQ8WXH6 277 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 NEIL2Q969S2 332 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 RAB7BQ96AH8 199 aa11.61□□□□□ -0.55
CLCN4-203ENST00000421085 ANKRD28O15084 1053 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms