RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 PCDHGB3Q9Y5G1 929 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 PCDHGA9Q9Y5G4 932 aaKnown RBP13.38□□□□□ -0.27
SGCE-202ENST00000415788 IGF2RP11717 2491 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 TRBV5-3A0A0A0MS03 114 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 SNPHO15079 494 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 PRKNO60260 465 aaPredicted RBP13.38□□□□□ -0.27
SGCE-202ENST00000415788 IGFBP5P24593 272 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 MLF1P58340 268 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 PSG6Q00889 435 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 RAPSNQ13702 412 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 TBR1Q16650 682 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 ABHD17BQ5VST6 288 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 TCTN3Q6NUS6 607 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 CDC73Q6P1J9 531 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 ANGPTL8Q6UXH0 198 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 HS3ST5Q8IZT8 346 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 SIRT6Q8N6T7 355 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 OR10A6Q8NH74 314 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 CNIH3Q8TBE1 160 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 SLC22A8Q8TCC7 542 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 SLC35G5Q96KT7 338 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 STACQ99469 402 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 THUMPD3Q9BV44 507 aaKnown RBP13.38□□□□□ -0.27
SGCE-202ENST00000415788 Q9N2J8 555 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 DUSP22Q9NRW4 184 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 SLC25A37Q9NYZ2 338 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 VAPAQ9P0L0 249 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.38□□□□□ -0.27
SGCE-202ENST00000415788 POU2F3Q9UKI9 436 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 DTX4Q9Y2E6 619 aa13.38□□□□□ -0.27
SGCE-202ENST00000415788 GPR55Q9Y2T6 319 aaPredicted RBP13.38□□□□□ -0.27
SGCE-202ENST00000415788 YARS2Q9Y2Z4 477 aaKnown RBP13.38□□□□□ -0.27
SGCE-202ENST00000415788 TMEM200CA6NKL6 621 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 A6NL46 340 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 CLIC1O00299 241 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 TO15178 435 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 XPNPEP2O43895 674 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 AGR2O95994 175 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 PSMB9P28065 219 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 MAP3K8P41279 467 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 ARHGDIAP52565 204 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 NRG3P56975 720 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 ST3GAL2Q16842 350 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 ZNF404Q494X3 552 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 GTDC1Q4AE62 458 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 RUNDC3AQ59EK9 446 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 ACER2Q5QJU3 275 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 EXOSC6Q5RKV6 272 aaKnown RBP13.37□□□□□ -0.27
SGCE-202ENST00000415788 TMEM236Q5W0B7 351 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 SNX29P2Q8IUI4 249 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 MSRB3Q8IXL7 192 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 SLC7A5P1Q8MH63 180 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 FDCSPQ8NFU4 85 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 ADAMTS15Q8TE58 950 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 THAP3Q8WTV1 239 aaPredicted RBP13.37□□□□□ -0.27
SGCE-202ENST00000415788 ZHX1-C8orf76Q96EF9 292 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 LMF1Q96S06 567 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 PIGUQ9H490 435 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 CDCP1Q9H5V8 836 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 ZNF552Q9H707 407 aaPredicted RBP13.37□□□□□ -0.27
SGCE-202ENST00000415788 ACOT13Q9NPJ3 140 aa13.37□□□□□ -0.27
SGCE-202ENST00000415788 EVPLLA8MZ36 301 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 MKRN2OSH3BPM6 223 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 ITGA10O75578 1167 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 NKX2-2O95096 273 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 CT45A8P0DMV1 189 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 CT45A9P0DMV2 189 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 MAGEA2P43356 314 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 KHKP50053 298 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 ZNF45Q02386 682 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 CT45A2Q5DJT8 189 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 TMEM179BQ7Z7N9 219 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 RNF130Q86XS8 419 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 AMER2Q8N7J2 671 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 OR52N2Q8NGI0 321 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 SLC9A6Q92581 669 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 ZNF486Q96H40 463 aaPredicted RBP13.36□□□□□ -0.27
SGCE-202ENST00000415788 PYURFQ96I23 114 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 NXF5Q9H1B4 397 aaKnown RBP13.36□□□□□ -0.27
SGCE-202ENST00000415788 THUMPD1Q9NXG2 353 aaKnown RBP13.36□□□□□ -0.27
SGCE-202ENST00000415788 STMN3Q9NZ72 180 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 NPAP1Q9NZP6 1156 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 PCDHGB7Q9Y5F8 929 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 AGAP5A6NIR3 686 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 EFCAB9A8MZ26 197 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 WWP2O00308 870 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 OR2J2O76002 312 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 MT-ND2P03891 347 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 MAP2K4P45985 399 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 MASP1P48740 699 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 NR0B1P51843 470 aaKnown RBP13.36□□□□□ -0.27
SGCE-202ENST00000415788 NCS1P62166 190 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 LSM3P62310 102 aaKnown RBP13.36□□□□□ -0.27
SGCE-202ENST00000415788 MAPK11Q15759 364 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 CYP27C1Q4G0S4 372 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 UBE2UQ5VVX9 321 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 B3GNTL1Q67FW5 361 aaPredicted RBP13.36□□□□□ -0.27
SGCE-202ENST00000415788 OPN5Q6U736 354 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 NANOGNBQ7Z5D8 188 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 SLC44A2Q8IWA5 706 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms