RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 SLC22A5O76082 557 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 PCDH8O95206 1070 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 ASGR2P07307 311 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 ACRP10323 421 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 HOXB3P14651 431 aaPredicted RBP9.09□□□□□ -0.95
CD44-206ENST00000415148 DRD3P35462 400 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 NUDT1P36639 197 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 ZNF136P52737 540 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 ZNF836Q6ZNA1 936 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 TMPRSS11FQ6ZWK6 438 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 PXKQ7Z7A4 578 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 ASPGQ86U10 573 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 CDK20Q8IZL9 346 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 OR4N4Q8N0Y3 316 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 OR8H3Q8N146 312 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 OR2L13Q8N349 312 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 LRRC25Q8N386 305 aaPredicted RBP9.09□□□□□ -0.95
CD44-206ENST00000415148 MS4A15Q8N5U1 240 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 LRRC17Q8N6Y2 441 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 SLC16A11Q8NCK7 471 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 ZNF680Q8NEM1 530 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 NT5CQ8TCD5 201 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 SLC2A12Q8TD20 617 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 KAT2AQ92830 837 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 ARMC5Q96C12 935 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 ZNF707Q96C28 371 aaPredicted RBP9.09□□□□□ -0.95
CD44-206ENST00000415148 SCMH1Q96GD3 660 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 NDC1Q9BTX1 674 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 HCAR1Q9BXC0 346 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 CRISPLD2Q9H0B8 497 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 BEX1Q9HBH7 125 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 EMC7Q9NPA0 242 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 ZNF275Q9NSD4 429 aaPredicted RBP9.09□□□□□ -0.95
CD44-206ENST00000415148 SIDT1Q9NXL6 827 aaKnown RBP9.09□□□□□ -0.95
CD44-206ENST00000415148 HAO2Q9NYQ3 351 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 GLTPQ9NZD2 209 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 COPZ2Q9P299 210 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 ZNF222Q9UK12 451 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 TMEM5Q9Y2B1 443 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 NPFFR2Q9Y5X5 522 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 CACNG2Q9Y698 323 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 MYO7AQ13402 2215 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 SCN2AQ99250 2005 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 CDK2AP1O14519 115 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 SHOXO15266 292 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 SC5DO75845 299 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 MPC2O95563 127 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 CFDP00746 253 aaPredicted RBP9.09□□□□□ -0.95
CD44-206ENST00000415148 DBIP07108 87 aaKnown RBP9.09□□□□□ -0.95
CD44-206ENST00000415148 UBL4AP11441 157 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 RPS4Y1P22090 263 aaKnown RBP9.09□□□□□ -0.95
CD44-206ENST00000415148 PRKACBP22694 351 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 RAG2P55895 527 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 CLDN2P57739 230 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 RPS15AP62244 130 aaKnown RBP9.09□□□□□ -0.95
CD44-206ENST00000415148 BTN3A2P78410 334 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 POU6F2P78424 691 aaPredicted RBP9.09□□□□□ -0.95
CD44-206ENST00000415148 PITPNAQ00169 270 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 IKZF1Q13422 519 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 RPE65Q16518 533 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 CDONQ4KMG0 1287 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 CCNJQ5T5M9 372 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 AGBL4Q5VU57 503 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 SFXN4Q6P4A7 337 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 TEX261Q6UWH6 196 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 SYT9Q86SS6 491 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 CDH24Q86UP0 819 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 SLC43A2Q8N370 569 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 FBXL6Q8N531 539 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 ABHD4Q8TB40 342 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 FANK1Q8TC84 345 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 ZNF431Q8TF32 576 aaPredicted RBP9.09□□□□□ -0.95
CD44-206ENST00000415148 CDS1Q92903 461 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 SDF2Q99470 211 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 TEAD3Q99594 435 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 C1QTNF6Q9BXI9 259 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 MFRPQ9BY79 579 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 ENKD1Q9H0I2 346 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 MED28Q9H204 178 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 ABCG5Q9H222 651 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 DPAGT1Q9H3H5 408 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 GHITMQ9H3K2 345 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 KIR3DX1Q9H7L2 352 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 CMC2Q9NRP2 79 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 NUDT15Q9NV35 164 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 B3GNT2Q9NY97 397 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 RABL2AQ9UBK7 228 aaPredicted RBP9.09□□□□□ -0.95
CD44-206ENST00000415148 KCNN3Q9UGI6 736 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 RABL2BQ9UNT1 228 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 BAIAP2Q9UQB8 552 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 SLC17A4Q9Y2C5 497 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 OR1A2Q9Y585 309 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 NUBP2Q9Y5Y2 271 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 RNF215Q9Y6U7 377 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 U3KQ87 197 aa9.09□□□□□ -0.95
CD44-206ENST00000415148 OTOL1A6NHN0 477 aaPredicted RBP9.08□□□□□ -0.96
CD44-206ENST00000415148 PRR23D1E9PI22 279 aaPredicted RBP9.08□□□□□ -0.96
CD44-206ENST00000415148 SOX30O94993 753 aa9.08□□□□□ -0.96
CD44-206ENST00000415148 PRR23D2P0DMB1 279 aaPredicted RBP9.08□□□□□ -0.96
CD44-206ENST00000415148 PEPDP12955 493 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms