RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 ITGB2P05107 769 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 GKN3PP0CG01 181 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 CNR1P21554 472 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 HTR2AP28223 471 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 ST13P50502 369 aaKnown RBP13□□□□□ -0.33
SF3B1-204ENST00000414963 SMIM11AP58511 58 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 HOXC5Q00444 222 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 SLC34A1Q06495 639 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 RAPSNQ13702 412 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 OR1C1Q15619 314 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 SPINK14Q6IE38 97 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 HMBOX1Q6NT76 420 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 ZNF613Q6PF04 617 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 BORAQ6PGQ7 559 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 DEF8Q6ZN54 512 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 TSPYL5Q86VY4 417 aaPredicted RBP13□□□□□ -0.33
SF3B1-204ENST00000414963 FADS6Q8N9I5 356 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 WDSUB1Q8N9V3 476 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 PIK3C3Q8NEB9 887 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 B4GALNT2Q8NHY0 566 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 ZCCHC14Q8WYQ9 949 aaKnown RBP13□□□□□ -0.33
SF3B1-204ENST00000414963 TMEM41AQ96HV5 264 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 PRRC1Q96M27 445 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 SIGLEC12Q96PQ1 595 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 BDH2Q9BUT1 245 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 NMNAT1Q9HAN9 279 aaPredicted RBP13□□□□□ -0.33
SF3B1-204ENST00000414963 PLA2G3Q9NZ20 509 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 PCDHGB7Q9Y5F8 929 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 ASPMQ8IZT6 3477 aa13□□□□□ -0.33
SF3B1-204ENST00000414963 CPAMD8Q8IZJ3 1885 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 ANKRD11Q6UB99 2663 aaPredicted RBP12.99□□□□□ -0.33
SF3B1-204ENST00000414963 DMXL2Q8TDJ6 3036 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 A0A1W2PRQ8 180 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 TRAPPC13A5PLN9 417 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 ANKUB1A6NFN9 424 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 B4DXG7 233 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 J3KTA2 159 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 SNPHO15079 494 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 ADAMDEC1O15204 470 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 SLC25A12O75746 678 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 CYP7B1O75881 506 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 DIRAS1O95057 198 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 LINGO3P0C6S8 592 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 UQCRBP14927 111 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 IFNA8P32881 189 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 DLX5P56178 289 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 PIN1Q13526 163 aaPredicted RBP12.99□□□□□ -0.33
SF3B1-204ENST00000414963 DGCR6Q14129 220 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 OR1Q1Q15612 314 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 TBR1Q16650 682 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 COL28A1Q2UY09 1125 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 ENTPD8Q5MY95 495 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 SLC25A25Q6KCM7 469 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 AMIGO2Q86SJ2 522 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 PACS2Q86VP3 889 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 OFCC1Q8IZS5 231 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 GPR119Q8TDV5 335 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 EPYCQ99645 322 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 FUZQ9BT04 418 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 PRR14Q9BWN1 585 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 ANKRD19PQ9H560 264 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 TMEM27Q9HBJ8 222 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 ACER3Q9NUN7 267 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 PPP4R1LQ9P1A2 415 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 PCDHGB6Q9Y5F9 930 aa12.99□□□□□ -0.33
SF3B1-204ENST00000414963 CHD8Q9HCK8 2581 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 C2orf72A6NCS6 295 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 C17orf51A8MQB3 221 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 ETV2O00321 342 aaPredicted RBP12.98□□□□□ -0.33
SF3B1-204ENST00000414963 CASQ2O14958 399 aaPredicted RBP12.98□□□□□ -0.33
SF3B1-204ENST00000414963 NME2P1O60361 137 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 LYPD3O95274 346 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 H1F0P07305 194 aaKnown RBP12.98□□□□□ -0.33
SF3B1-204ENST00000414963 SP1P08047 785 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 CD46P15529 392 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 PGCP20142 388 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 NME2P22392 152 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 ELAVL4P26378 380 aaKnown RBP12.98□□□□□ -0.33
SF3B1-204ENST00000414963 GCKP35557 465 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 YAP1P46937 504 aaKnown RBP12.98□□□□□ -0.33
SF3B1-204ENST00000414963 LIMS1P48059 325 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 TNFSF10P50591 281 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 ARG2P78540 354 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 ST3GAL3Q11203 375 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 CBFBQ13951 182 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 COLEC12Q5KU26 742 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 SWT1Q5T5J6 900 aaKnown RBP12.98□□□□□ -0.33
SF3B1-204ENST00000414963 PRAMEF20Q5VT98 475 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 FBXW10Q5XX13 1052 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 TIGD3Q6B0B8 471 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 WBP2NLQ6ICG8 309 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 PLCZ1Q86YW0 608 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 OR2M3Q8NG83 312 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 OR4C15Q8NGM1 316 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 ADAMTS16Q8TE57 1224 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 DNAJA4Q8WW22 397 aaPredicted RBP12.98□□□□□ -0.33
SF3B1-204ENST00000414963 NRBF2Q96F24 287 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 SCMH1Q96GD3 660 aa12.98□□□□□ -0.33
SF3B1-204ENST00000414963 SH3YL1Q96HL8 342 aaPredicted RBP12.98□□□□□ -0.33
SF3B1-204ENST00000414963 FAM173AQ9BQD7 235 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms