RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 SSX1Q16384 188 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 ZNF181Q2M3W8 571 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 ULK3Q6PHR2 472 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 FIGNL1Q6PIW4 674 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 DCDC5Q6ZRR9 648 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 LAPTM4BQ86VI4 370 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 FRMD1Q8N878 549 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 ZNF527Q8NB42 609 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 SIMC1Q8NDZ2 872 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 OR52N1Q8NH53 320 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 OR51Q1Q8NH59 317 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 FANK1Q8TC84 345 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 DNAJA4Q8WW22 397 aaPredicted RBP12.55□□□□□ -0.4
LIMS1-205ENST00000410093 MMABQ96EY8 250 aaPredicted RBP12.55□□□□□ -0.4
LIMS1-205ENST00000410093 HSPA12BQ96MM6 686 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 ZNF426Q9BUY5 554 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 PRR14Q9BWN1 585 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 MROQ9BYG7 248 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 SLC19A3Q9BZV2 496 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 UBQLN3Q9H347 655 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 SYNDIG1Q9H7V2 258 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 IRAK4Q9NWZ3 460 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 HCN3Q9P1Z3 774 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 KCNE5Q9UJ90 142 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 CORINQ9Y5Q5 1042 aa12.55□□□□□ -0.4
LIMS1-205ENST00000410093 GXYLT2A0PJZ3 443 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 TMEM150CB9EJG8 249 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 ZNF670-ZNF695F2Z2N8 137 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 PEX12O00623 359 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 POLR1CO15160 346 aaPredicted RBP12.54□□□□□ -0.4
LIMS1-205ENST00000410093 TOX3O15405 576 aaPredicted RBP12.54□□□□□ -0.4
LIMS1-205ENST00000410093 HCRTR1O43613 425 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 IL1AP01583 271 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 IGHA1P01876 353 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 TSPAN19P0C672 248 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 OCM2P0CE71 109 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 OCMP0CE72 109 aaPredicted RBP12.54□□□□□ -0.4
LIMS1-205ENST00000410093 IFI30P13284 250 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 GLB1P16278 677 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 GPR4P46093 362 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 SLC9A3P48764 834 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 ARL4DP49703 201 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 RORCP51449 518 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 ITGADQ13349 1161 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 PLK5Q496M5 336 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 SMARCD3Q6STE5 483 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 QSOX2Q6ZRP7 698 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 C11orf74Q86VG3 221 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 PHC2Q8IXK0 858 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 OR4Q3Q8NH05 313 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 SLC2A12Q8TD20 617 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 UFD1Q92890 307 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 BPIFA2Q96DR5 249 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 ART5Q96L15 291 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 SLC46A1Q96NT5 459 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 TGM7Q96PF1 710 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 CENPOQ9BU64 300 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 MED18Q9BUE0 208 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 CDADC1Q9BWV3 514 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 MIR1-1HGQ9H1L0 117 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 OR10A5Q9H207 317 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 OR52D1Q9H346 318 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 DNAJB12Q9NXW2 375 aaKnown RBP12.54□□□□□ -0.4
LIMS1-205ENST00000410093 GALNT8Q9NY28 637 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 RPS6KB2Q9UBS0 482 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 CBLCQ9ULV8 474 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 GSTK1Q9Y2Q3 226 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 NUP210LQ5VU65 1888 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 CFAP54Q96N23 3096 aa12.54□□□□□ -0.4
LIMS1-205ENST00000410093 SLC22A31A6NKX4 558 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 LOC110117498-PIK3R3F6TDL0 507 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 J3QRK9 145 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 SLC30A4O14863 429 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 BCAT2O15382 392 aaPredicted RBP12.53□□□□□ -0.4
LIMS1-205ENST00000410093 AKAP8O43823 692 aaKnown RBP12.53□□□□□ -0.4
LIMS1-205ENST00000410093 HBQ1P09105 142 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 BMP4P12644 408 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 CD53P19397 219 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 PAICSP22234 425 aaKnown RBP12.53□□□□□ -0.4
LIMS1-205ENST00000410093 CD1CP29017 333 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 CRYBB2P43320 205 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 HOXC5Q00444 222 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 RUNX1T1Q06455 604 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 ZNF267Q14586 743 aaPredicted RBP12.53□□□□□ -0.4
LIMS1-205ENST00000410093 PDZK1Q5T2W1 519 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 SLC30A6Q6NXT4 461 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 WDR74Q6RFH5 385 aaPredicted RBP12.53□□□□□ -0.4
LIMS1-205ENST00000410093 LINC00114Q6XXX2 140 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 RTL4Q6ZR62 310 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 PRSS42Q7Z5A4 293 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 KLHL36Q8N4N3 616 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 ZNF615Q8N8J6 731 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 ARHGAP9Q9BRR9 750 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 NUAK2Q9H093 628 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 EXOSC3Q9NQT5 275 aaKnown RBP12.53□□□□□ -0.4
LIMS1-205ENST00000410093 CMC2Q9NRP2 79 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 TAS2R16Q9NYV7 291 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 LRIT1Q9P2V4 623 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 CLEC2DQ9UHP7 191 aa12.53□□□□□ -0.4
LIMS1-205ENST00000410093 SLCO1B1Q9Y6L6 691 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms