RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 CLVS1Q8IUQ0 354 aaPredicted RBP11.6□□□□□ -0.55
CHRNA1-205ENST00000409542 LINC01560Q8TB33 94 aa11.6□□□□□ -0.55
CHRNA1-205ENST00000409542 FAM222BQ8WU58 562 aa11.6□□□□□ -0.55
CHRNA1-205ENST00000409542 ISOC1Q96CN7 298 aa11.6□□□□□ -0.55
CHRNA1-205ENST00000409542 ARSGQ96EG1 525 aa11.6□□□□□ -0.55
CHRNA1-205ENST00000409542 NRBF2Q96F24 287 aa11.6□□□□□ -0.55
CHRNA1-205ENST00000409542 C18orf12Q96KH6 178 aa11.6□□□□□ -0.55
CHRNA1-205ENST00000409542 AMBRA1Q9C0C7 1298 aa11.6□□□□□ -0.55
CHRNA1-205ENST00000409542 BHLHE41Q9C0J9 482 aaPredicted RBP11.6□□□□□ -0.55
CHRNA1-205ENST00000409542 OR8D2Q9GZM6 311 aa11.6□□□□□ -0.55
CHRNA1-205ENST00000409542 EXO5Q9H790 373 aa11.6□□□□□ -0.55
CHRNA1-205ENST00000409542 CXorf21Q9HAI6 301 aa11.6□□□□□ -0.55
CHRNA1-205ENST00000409542 SH2D2AQ9NP31 389 aa11.6□□□□□ -0.55
CHRNA1-205ENST00000409542 IL1RAPQ9NPH3 570 aa11.6□□□□□ -0.55
CHRNA1-205ENST00000409542 ORC6Q9Y5N6 252 aa11.6□□□□□ -0.55
CHRNA1-205ENST00000409542 CLCA3PQ9Y6N3 262 aa11.6□□□□□ -0.55
CHRNA1-205ENST00000409542 NINQ8N4C6 2090 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 A0A1W2PPR1 153 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 C1orf226A1L170 272 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 RNASET2O00584 256 aaKnown RBP11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 CLDN4O14493 209 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 PCDH7O60245 1069 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 HCN1O60741 890 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 CTNSO60931 367 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 LDB3O75112 727 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 E2F6O75461 281 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 CPSF4O95639 269 aaKnown RBP11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 P04436 131 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 INHBBP09529 407 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 GABRA1P14867 456 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 KDELR2P33947 212 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 PCGF2P35227 344 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 RPL3P39023 403 aaKnown RBP11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 STXBP1P61764 594 aaKnown RBP11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 RPS13P62277 151 aaKnown RBP11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 ID2Q02363 134 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 PMS2P3Q13401 168 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 SLBPQ14493 270 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 HIST2H2ACQ16777 129 aaPredicted RBP11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 C11orf91Q3C1V1 193 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 HIST2H2AA3Q6FI13 130 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 OR2T5Q6IEZ7 315 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 DHRS4L2Q6PKH6 230 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 LYPD8Q6UX82 237 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 ZNF621Q6ZSS3 439 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 KCTD8Q6ZWB6 473 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 CBLL1Q75N03 491 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 PIWIL3Q7Z3Z3 882 aaKnown RBP11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 TMEM179BQ7Z7N9 219 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 ZNF595Q8IYB9 648 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 CLECL1Q8IZS7 167 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 MORN4Q8NDC4 146 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 OR2T29Q8NH02 315 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 SLC2A12Q8TD20 617 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 ZNF721Q8TF20 911 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 FBLIM1Q8WUP2 373 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 RNASE6Q93091 150 aaKnown RBP11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 B4GALT7Q9UBV7 327 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 TMEFF2Q9UIK5 374 aaPredicted RBP11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 BLOC1S6Q9UL45 172 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 DAPP1Q9UN19 280 aa11.59□□□□□ -0.55
CHRNA1-205ENST00000409542 TRIM64BA6NI03 449 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 LRRC3CA6NJW4 275 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 HSPB2A8KAH6 182 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 C17orf105B2RV13 164 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 B3GALT2O43825 422 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 ZNF682O95780 498 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 FPR1P21462 350 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 CRHBPP24387 322 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 ELK4P28324 431 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 CEACAM8P31997 349 aaPredicted RBP11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 RYKP34925 604 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 PIK3CBP42338 1070 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 ASCL1P50553 236 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 AGFG1P52594 562 aaKnown RBP11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 ZNF136P52737 540 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 PHEXP78562 749 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 ZNF763Q0D2J5 394 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 KEAP1Q14145 624 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 RAB39AQ14964 217 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 HSPB2Q16082 182 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 ZNF791Q3KP31 576 aaPredicted RBP11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 LRRC23Q53EV4 343 aaPredicted RBP11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 C6orf141Q5SZD1 244 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 PRAMEF20Q5VT98 475 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 ZNF691Q5VV52 312 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 CLEC9AQ6UXN8 241 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 DGAT2L6Q6ZPD8 337 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 R3HCC1LQ7Z5L2 792 aaKnown RBP11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 HS3ST5Q8IZT8 346 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 OR13F1Q8NGS4 319 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 DOK4Q8TEW6 326 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 DAZLQ92904 295 aaKnown RBP11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 UBE2E3Q969T4 207 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 SGCZQ96LD1 299 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 ZNF703Q9H7S9 590 aaPredicted RBP11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 TPT1P8Q9HAU6 139 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 ATAD3AQ9NVI7 634 aa11.58□□□□□ -0.56
CHRNA1-205ENST00000409542 VNN3Q9NY84 501 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms