RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 LOC100653049A0A140TA62 436 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 GMNCA6NCL1 334 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 C5orf58C9J3I9 102 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 H0YC42 278 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 AP3D1O14617 1153 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 KRT34O76011 436 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 CLDN1O95832 211 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 OPN1LWP04000 364 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 PEPDP12955 493 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 GABRA1P14867 456 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 ZNF708P17019 499 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 ZNF17P17021 662 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 IL11P20809 199 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 RPS4Y1P22090 263 aaKnown RBP9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 PPIBP23284 216 aaKnown RBP9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 CHMP24386 653 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 MSX1P28360 303 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 AQP1P29972 269 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 RYKP34925 604 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 PGM1P36871 562 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 TPD52P55327 224 aaPredicted RBP9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 SUMO3P55854 103 aaPredicted RBP9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 CLDN20P56880 219 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 PMPCAQ10713 525 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 QPRTQ15274 297 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 CYP51A1Q16850 503 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 TRMT5Q32P41 509 aaKnown RBP9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 MRPL2Q5T653 305 aaKnown RBP9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 MTFR2Q6P444 385 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 POMZP3Q6PJE2 187 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 EIF3MQ7L2H7 374 aaKnown RBP9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 CCDC71Q8IV32 467 aaPredicted RBP9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 PEX5LQ8IYB4 626 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 PM20D2Q8IYS1 436 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 DPP10Q8N608 796 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 TOR1AIP2Q8NFQ8 470 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 OR10Q1Q8NGQ4 319 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 POC1BQ8TC44 478 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 PHF10Q8WUB8 498 aaKnown RBP9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 RCN3Q96D15 328 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 ANKRD27Q96NW4 1050 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 CGREF1Q99674 301 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 TREX2Q9BQ50 279 aaPredicted RBP9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 PIGQQ9BRB3 760 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 THUMPD3Q9BV44 507 aaKnown RBP9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 SAP130Q9H0E3 1048 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 CACYBPQ9HB71 228 aaKnown RBP9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 A4GALTQ9NPC4 353 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 CALML5Q9NZT1 146 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 CORO2BQ9UQ03 480 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 RNF6Q9Y252 685 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 ZNF443Q9Y2A4 671 aaPredicted RBP9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 ZNF337Q9Y3M9 751 aa9.29□□□□□ -0.92
TSPAN9-202ENST00000407263 A0A087WZY1 265 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 AGAP5A6NIR3 686 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 CLCA1A8K7I4 914 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 BBIP1A8MTZ0 92 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 EVPLLA8MZ36 301 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 FXYD1O00168 92 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 EIF1AYO14602 144 aaKnown RBP9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 SNX3O60493 162 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 DBIP07108 87 aaKnown RBP9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 TFPTP0C1Z6 253 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 LINGO3P0C6S8 592 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 GLI4P10075 376 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 ARAFP10398 606 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 BMP2P12643 396 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 IL7RP16871 459 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 PRKCAP17252 672 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 PAX7P23759 505 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 SFTPDP35247 375 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 ADH7P40394 386 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 MAGEA8P43361 318 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 SMSP52788 366 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 SUCLG1P53597 346 aaKnown RBP9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 KCNJ10P78508 379 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 CBFBQ13951 182 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 SCARB2Q14108 478 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 LIN52Q52LA3 116 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 RUNDC3AQ59EK9 446 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 SWT1Q5T5J6 900 aaKnown RBP9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 MTDHQ86UE4 582 aaKnown RBP9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 TREML1Q86YW5 311 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 ZNF808Q8N4W9 903 aaPredicted RBP9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 MEIOBQ8N635 442 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 NAXEQ8NCW5 288 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 FAM71CQ8NEG0 241 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 ATP6V1C2Q8NEY4 427 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 TNIP2Q8NFZ5 429 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 OR52P1PQ8NH57 321 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 OR5W2Q8NH69 310 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 FBXO27Q8NI29 283 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 BBS10Q8TAM1 723 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 GPR119Q8TDV5 335 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 TSPEARQ8WU66 669 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 CNOT9Q92600 299 aaKnown RBP9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 RND1Q92730 232 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 ZBTB8AQ96BR9 441 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 ZNF524Q96C55 264 aa9.28□□□□□ -0.92
TSPAN9-202ENST00000407263 ARPC5LQ9BPX5 153 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms