RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 B4GALNT2Q8NHY0 566 aa14.49□□□□□ -0.09
HMGA1-204ENST00000401473 CCDC124Q96CT7 223 aaKnown RBP14.49□□□□□ -0.09
HMGA1-204ENST00000401473 BARD1Q99728 777 aaKnown RBP14.49□□□□□ -0.09
HMGA1-204ENST00000401473 ASF1BQ9NVP2 202 aa14.49□□□□□ -0.09
HMGA1-204ENST00000401473 TTLL8A6PVC2 850 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 ARPC2O15144 300 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 RRP9O43818 475 aaKnown RBP14.48□□□□□ -0.09
HMGA1-204ENST00000401473 EIF4E2O60573 245 aaKnown RBP14.48□□□□□ -0.09
HMGA1-204ENST00000401473 LGI1O95970 557 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 FESP07332 822 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 ZNF24P17028 368 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 ACAA2P42765 397 aaKnown RBP14.48□□□□□ -0.09
HMGA1-204ENST00000401473 P2RX1P51575 399 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 SELENOWP63302 87 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 HOXC5Q00444 222 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 INAQ16352 499 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 CYBRD1Q53TN4 286 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 CMPK2Q5EBM0 449 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 SLC22A16Q86VW1 577 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 LSRQ86X29 649 aaPredicted RBP14.48□□□□□ -0.09
HMGA1-204ENST00000401473 SIAH3Q8IW03 269 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 ULK2Q8IYT8 1036 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 OR4D11Q8NGI4 311 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 SLC26A7Q8TE54 656 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 FAR1Q8WVX9 515 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 PINK1Q9BXM7 581 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 DEFB127Q9H1M4 99 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 ZDHHC11Q9H8X9 412 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 MPDZO75970 2070 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 B8ZZF3 427 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 ACOT8O14734 319 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 CDC40O60508 579 aaKnown RBP eCLIP14.48□□□□□ -0.09
HMGA1-204ENST00000401473 TPST2O60704 377 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 SERPINA1P01009 418 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 ENDOUP21128 410 aaKnown RBP14.48□□□□□ -0.09
HMGA1-204ENST00000401473 GDF1P27539 372 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 MSX1P28360 303 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 RYKP34925 604 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 YTHDF3Q7Z739 585 aaKnown RBP14.48□□□□□ -0.09
HMGA1-204ENST00000401473 OR4K17Q8NGC6 315 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 OR5W2Q8NH69 310 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 GPR119Q8TDV5 335 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 UTP4Q969X6 686 aaKnown RBP14.48□□□□□ -0.09
HMGA1-204ENST00000401473 C1GALT1C1Q96EU7 318 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 PRR14Q9BWN1 585 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 DCAF13Q9NV06 445 aaKnown RBP14.48□□□□□ -0.09
HMGA1-204ENST00000401473 ACTR3BQ9P1U1 418 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 SLC7A8Q9UHI5 535 aa14.48□□□□□ -0.09
HMGA1-204ENST00000401473 AP3D1O14617 1153 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 TRAPPC6AO75865 159 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 TNFRSF1BP20333 461 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 DPP4P27487 766 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 ZNF136P52737 540 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 DSCR4P56555 118 aaPredicted RBP14.47□□□□□ -0.09
HMGA1-204ENST00000401473 ALDH6A1Q02252 535 aaKnown RBP14.47□□□□□ -0.09
HMGA1-204ENST00000401473 ZSCAN26Q16670 478 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 EIPR1Q53HC9 387 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 CYP2R1Q6VVX0 501 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 CBLL1Q75N03 491 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 VTCN1Q7Z7D3 282 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 YRDCQ86U90 279 aaKnown RBP14.47□□□□□ -0.09
HMGA1-204ENST00000401473 RBM45Q8IUH3 476 aaKnown RBP14.47□□□□□ -0.09
HMGA1-204ENST00000401473 SPPL2CQ8IUH8 684 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 LACC1Q8IV20 430 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 FAM109AQ8N4B1 249 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 FAM86B1Q8N7N1 296 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 FAM83FQ8NEG4 500 aaPredicted RBP14.47□□□□□ -0.09
HMGA1-204ENST00000401473 FAM162AQ96A26 154 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 MCUR1Q96AQ8 359 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 ASB9Q96DX5 294 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 EXOSC3Q9NQT5 275 aaKnown RBP14.47□□□□□ -0.09
HMGA1-204ENST00000401473 VDAC3Q9Y277 283 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 SH3GLB1Q9Y371 365 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 SNX13Q9Y5W8 968 aa14.47□□□□□ -0.09
HMGA1-204ENST00000401473 NPIPA5E9PKD4 350 aa14.46□□□□□ -0.09
HMGA1-204ENST00000401473 TFECO14948 347 aaPredicted RBP14.46□□□□□ -0.09
HMGA1-204ENST00000401473 LINGO3P0C6S8 592 aa14.46□□□□□ -0.09
HMGA1-204ENST00000401473 TCEA1P23193 301 aaKnown RBP14.46□□□□□ -0.09
HMGA1-204ENST00000401473 OR1E2P47887 323 aa14.46□□□□□ -0.09
HMGA1-204ENST00000401473 CCR4P51679 360 aa14.46□□□□□ -0.09
HMGA1-204ENST00000401473 BNIP2Q12982 314 aa14.46□□□□□ -0.09
HMGA1-204ENST00000401473 SLC10A1Q14973 349 aa14.46□□□□□ -0.09
HMGA1-204ENST00000401473 TOMM20Q15388 145 aa14.46□□□□□ -0.09
HMGA1-204ENST00000401473 FAM180AQ6UWF9 173 aa14.46□□□□□ -0.09
HMGA1-204ENST00000401473 TMCO5AQ8N6Q1 288 aa14.46□□□□□ -0.09
HMGA1-204ENST00000401473 TPD52L3Q96J77 140 aa14.46□□□□□ -0.09
HMGA1-204ENST00000401473 PTGES2Q9H7Z7 377 aa14.46□□□□□ -0.09
HMGA1-204ENST00000401473 MED17Q9NVC6 651 aa14.46□□□□□ -0.09
HMGA1-204ENST00000401473 MAGEL2Q9UJ55 1249 aa14.46□□□□□ -0.09
HMGA1-204ENST00000401473 NPIPA1Q9UND3 350 aa14.46□□□□□ -0.09
HMGA1-204ENST00000401473 POMPQ9Y244 141 aa14.46□□□□□ -0.09
HMGA1-204ENST00000401473 RPH3AQ9Y2J0 694 aaPredicted RBP14.46□□□□□ -0.09
HMGA1-204ENST00000401473 LIPGQ9Y5X9 500 aa14.46□□□□□ -0.09
HMGA1-204ENST00000401473 ANKUB1A6NFN9 424 aa14.46□□□□□ -0.1
HMGA1-204ENST00000401473 SHISA8B8ZZ34 492 aa14.46□□□□□ -0.1
HMGA1-204ENST00000401473 ZNHIT1O43257 154 aa14.46□□□□□ -0.1
HMGA1-204ENST00000401473 NUDT14O95848 222 aa14.46□□□□□ -0.1
HMGA1-204ENST00000401473 IFNA14P01570 189 aa14.46□□□□□ -0.1
HMGA1-204ENST00000401473 CRYABP02511 175 aaKnown RBP14.46□□□□□ -0.1
HMGA1-204ENST00000401473 HPNP05981 417 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms