RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ARID1AO14497 2285 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 ALPK3Q96L96 1907 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 MEIKINA0A087WXM9 373 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 ANKRD61A6NGH8 418 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 CDC42EP2O14613 210 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 FCMRO60667 390 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 KHDRBS3O75525 346 aaKnown RBP9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 GSTM3P21266 225 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 CTGFP29279 349 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 GDNFP39905 211 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 NDUFA9Q16795 377 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 ZNF783Q6ZMS7 281 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 GET4Q7L5D6 327 aaPredicted RBP9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 ADGRG3Q86Y34 549 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 RELL2Q8NC24 303 aaPredicted RBP9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 ZNF485Q8NCK3 441 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 ABHD4Q8TB40 342 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 GNPDA2Q8TDQ7 276 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 ADAMTS14Q8WXS8 1223 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 PRRC1Q96M27 445 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 CASD1Q96PB1 797 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 C20orf85Q9H1P6 137 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 C11orf49Q9H6J7 331 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 RPS6KB2Q9UBS0 482 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 CBLCQ9ULV8 474 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 COL4A4P53420 1690 aaPredicted RBP9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 IRGMA1A4Y4 181 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 ANTXRLA6NF34 631 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 SURF4O15260 269 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 SPDEFO95238 335 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 FGBP02675 491 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 ATF1P18846 271 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 CXCL2P19875 107 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 NPR2P20594 1047 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 MMP12P39900 470 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 FLT3LGP49771 235 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 METAP1P53582 386 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 PNLIPRP1P54315 467 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 POLR2LP62875 67 aaKnown RBP9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 ZNF33BQ06732 778 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 CAMK1Q14012 370 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 TP53I3Q53FA7 332 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 AADACL4Q5VUY2 407 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 RNLSQ5VYX0 342 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 CST9Q5W186 159 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 ARL14Q8N4G2 192 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 ANKRD53Q8N9V6 530 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 OR51A7Q8NH64 312 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 ACOT12Q8WYK0 555 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 RAD51AP1Q96B01 352 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 DERL3Q96Q80 235 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 LYSMD1Q96S90 227 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 SLC25A18Q9H1K4 315 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 WDR26Q9H7D7 661 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 SLC25A13Q9UJS0 675 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 CASP8AP2Q9UKL3 1982 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 SLC5A10A0PJK1 596 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 FOXE1O00358 373 aaPredicted RBP9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 PDCD5O14737 125 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 CLTBP09497 229 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 RAB3BP20337 219 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 ATP5A1P25705 553 aaKnown RBP9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 RBMS1P29558 406 aaKnown RBP9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 IFNGR2P38484 337 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 ERVK-21P61565 698 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 TSPAN31Q12999 210 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 PGGHGQ32M88 737 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 ENTPD8Q5MY95 495 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 KHDRBS2Q5VWX1 349 aaKnown RBP9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 C18orf63Q68DL7 685 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 FAM198BQ6UWH4 519 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 TMEM150AQ86TG1 271 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 C17orf64Q86WR6 236 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 GHSRQ92847 366 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 MCHR1Q99705 422 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 DPH7Q9BTV6 452 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 TMEM168Q9H0V1 697 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 TRIM36Q9NQ86 728 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 ASB4Q9Y574 426 aa9.19□□□□□ -0.94
PTCHD4-202ENST00000398738 SLC22A23A1A5C7 686 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 KDM4EB2RXH2 506 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 LRRN3E7EW58 273 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 H0YC42 278 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 POP7O75817 140 aaKnown RBP9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 RLN1P04808 185 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 GKN3PP0CG01 181 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 SULT1A3P0DMM9 295 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 SULT1A4P0DMN0 295 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 DRD2P14416 443 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 THBS2P35442 1172 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 MTNR1BP49286 362 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 TPMTP51580 245 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 CCR8P51685 355 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 FKBP1BP68106 108 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 EFNB1P98172 346 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 HTR4Q13639 388 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 TRAM2Q15035 370 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 DUSP6Q16828 381 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 LRFN4Q6PJG9 635 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 POGLUT1Q8NBL1 392 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms