RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 DIMT1Q9UNQ2 313 aaKnown RBP6.12□□□□□ -1.43
SMCO1-201ENST00000397537 POLDIP2Q9Y2S7 368 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 NSG2Q9Y328 171 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 PVALEFA0A1B0GWK0 134 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.11□□□□□ -1.43
SMCO1-201ENST00000397537 FBP2O00757 339 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 GMDSO60547 372 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 GRAP2O75791 330 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 UBTFL1P0CB47 393 aaPredicted RBP6.11□□□□□ -1.43
SMCO1-201ENST00000397537 PRF1P14222 555 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 ITGA2P17301 1181 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 PCSK6P29122 969 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 GDNFP39905 211 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 CRYBB2P43320 205 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 CCDC58Q4VC31 144 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 C1QL3Q5VWW1 255 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 KCTD16Q68DU8 428 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 FAM109BQ6ICB4 259 aaPredicted RBP6.11□□□□□ -1.43
SMCO1-201ENST00000397537 CDC42EP5Q6NZY7 148 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 VITQ6UXI7 678 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 DCDC5Q6ZRR9 648 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 POLNQ7Z5Q5 900 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 SPRED2Q7Z698 418 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 KMT5CQ86Y97 462 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 PELI3Q8N2H9 469 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 MARVELD2Q8N4S9 558 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 SLC5A8Q8N695 610 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 LRRC75AQ8NAA5 344 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 RASSF5Q8WWW0 418 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 SMPDL3AQ92484 453 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 MTERF3Q96E29 417 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 SYT11Q9BT88 431 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 CD209Q9NNX6 404 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 OR2S2Q9NQN1 319 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 DIABLOQ9NR28 239 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 INTS9Q9NV88 658 aaKnown RBP6.11□□□□□ -1.43
SMCO1-201ENST00000397537 IFNKQ9P0W0 207 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 MRTO4Q9UKD2 239 aaKnown RBP6.11□□□□□ -1.43
SMCO1-201ENST00000397537 PILRAQ9UKJ1 303 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 PADI3Q9ULW8 664 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 STARD10Q9Y365 291 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 LOXL2Q9Y4K0 774 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 PRUNE2Q8WUY3 3088 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 TRGV11A0A075B6L2 103 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 A8MX80 341 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 H0YJX3 145 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 KLRC4-KLRK1H3BQV0 150 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 RRHO14718 337 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 CLOCKO15516 846 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 SNAI2O43623 268 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 CST4P01036 141 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 TRIM49P0CI25 452 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 TRIM49CP0CI26 452 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 ENGP17813 658 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 MSH3P20585 1137 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 HMGCLP35914 325 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 SLC1A2P43004 574 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 MRPL19P49406 292 aaKnown RBP6.11□□□□□ -1.43
SMCO1-201ENST00000397537 PSMD4P55036 377 aaKnown RBP6.11□□□□□ -1.43
SMCO1-201ENST00000397537 ACTBP60709 375 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 ACTA2P62736 377 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 ACTG1P63261 375 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 ACTG2P63267 376 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 ACTC1P68032 377 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 ACTA1P68133 377 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 LCN2P80188 198 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 RELAQ04206 551 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 GABPAQ06546 454 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 MESP2Q0VG99 397 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 HNF4GQ14541 408 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 RSPO4Q2I0M5 234 aaPredicted RBP6.11□□□□□ -1.43
SMCO1-201ENST00000397537 ACCSLQ4AC99 568 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 OTUD3Q5T2D3 398 aaPredicted RBP6.11□□□□□ -1.43
SMCO1-201ENST00000397537 TIGD3Q6B0B8 471 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 C11orf63Q6NUN7 778 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 TP53INP2Q8IXH6 220 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 ZNF34Q8IZ26 560 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 OR1F12Q8NHA8 337 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 RMND5BQ96G75 393 aaPredicted RBP6.11□□□□□ -1.43
SMCO1-201ENST00000397537 IL4I1Q96RQ9 567 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 PSD2Q9BQI7 771 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 THAP7Q9BT49 309 aaPredicted RBP6.11□□□□□ -1.43
SMCO1-201ENST00000397537 BDH2Q9BUT1 245 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 KRTAP9-2Q9BYQ4 174 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 NPFFR1Q9GZQ6 430 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 OR51B5Q9H339 312 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 LPAR2Q9HBW0 351 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 STMN3Q9NZ72 180 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 SPATA2Q9UM82 520 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 AP3M1Q9Y2T2 418 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 HS3ST3A1Q9Y663 406 aa6.11□□□□□ -1.43
SMCO1-201ENST00000397537 ANKRD26Q9UPS8 1709 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 ATP6AP2A0A1C7CYW4 349 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 BCLAF3A2AJT9 711 aaKnown RBP6.1□□□□□ -1.43
SMCO1-201ENST00000397537 SMCO2A6NFE2 343 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 ZBTB5O15062 677 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 ARPC1BO15143 372 aaKnown RBP6.1□□□□□ -1.43
SMCO1-201ENST00000397537 CNOT3O75175 753 aaKnown RBP6.1□□□□□ -1.43
SMCO1-201ENST00000397537 CD82P27701 267 aa6.1□□□□□ -1.43
SMCO1-201ENST00000397537 NUDT1P36639 197 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms