RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ETHE1O95571 254 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 CA1P00915 261 aaPredicted RBP4.38□□□□□ -1.71
GABPB1-204ENST00000396464 CST4P01036 141 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 P04436 131 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 ANXA5P08758 320 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 DARSP14868 501 aaKnown RBP4.38□□□□□ -1.71
GABPB1-204ENST00000396464 PMCHP20382 165 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 SYT1P21579 422 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 ID1P41134 155 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 BRCC3P46736 316 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 HLCSP50747 726 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 B3GALT5-AS1P59052 145 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 PRPS1P60891 318 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 ADARB1P78563 741 aaKnown RBP4.38□□□□□ -1.71
GABPB1-204ENST00000396464 CNTN1Q12860 1018 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 KLRB1Q12918 225 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 MADCAM1Q13477 382 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 SF3B4Q15427 424 aaKnown RBP eCLIP4.38□□□□□ -1.71
GABPB1-204ENST00000396464 SNCBQ16143 134 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 PPP1R3AQ16821 1122 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 DUSP6Q16828 381 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 TP53I3Q53FA7 332 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 MTX3Q5HYI7 312 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 EARS2Q5JPH6 523 aaKnown RBP4.38□□□□□ -1.71
GABPB1-204ENST00000396464 DCAF12Q5T6F0 453 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 PLPP4Q5VZY2 271 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 STEAP1BQ6NZ63 245 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 LEG1Q6P5S2 330 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 LRRC74BQ6ZQY2 392 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 PTF1AQ7RTS3 328 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 SLC16A14Q7RTX9 510 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 FAM122BQ7Z309 247 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 KMT5CQ86Y97 462 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 MARCH9Q86YJ5 346 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 GPC2Q8N158 579 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 CSNK1A1LQ8N752 337 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 ZNF248Q8NDW4 579 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 B3GNT7Q8NFL0 401 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 MAGEE2Q8TD90 523 aaPredicted RBP4.38□□□□□ -1.71
GABPB1-204ENST00000396464 CA5BP1Q8WTZ4 195 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 FCAMRQ8WWV6 532 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 PIK3R3Q92569 461 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 NR4A3Q92570 626 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 ECHDC3Q96DC8 303 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 ZFYVE19Q96K21 471 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 NAT9Q9BTE0 207 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 MAP1LC3CQ9BXW4 147 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 DRC3Q9H069 523 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 NXF5Q9H1B4 397 aaKnown RBP4.38□□□□□ -1.71
GABPB1-204ENST00000396464 NEUROG2Q9H2A3 272 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 EBF3Q9H4W6 596 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 NMRAL1Q9HBL8 299 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 DMAP1Q9NPF5 467 aaPredicted RBP4.38□□□□□ -1.71
GABPB1-204ENST00000396464 PRSS16Q9NQE7 514 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 FKBP14Q9NWM8 211 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 IL36AQ9UHA7 158 aa4.38□□□□□ -1.71
GABPB1-204ENST00000396464 ABCC8Q09428 1581 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 FANCD2Q9BXW9 1451 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 POLR2AP24928 1970 aaKnown RBP4.37□□□□□ -1.71
GABPB1-204ENST00000396464 MYH14Q7Z406 1995 aaKnown RBP4.37□□□□□ -1.71
GABPB1-204ENST00000396464 A0A1B0GUS0 222 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 C5orf60A6NFR6 353 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 PRAMEF26H0Y7S4 382 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 P2RX6O15547 441 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 ENTPD5O75356 428 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 C1QL1O75973 258 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 VAPBO95292 243 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 DCNP07585 359 aaKnown RBP4.37□□□□□ -1.71
GABPB1-204ENST00000396464 GP1BBP13224 206 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 AOC1P19801 751 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 AADACP22760 399 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 LHCGRP22888 699 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 GABRR2P28476 465 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 GNA11P29992 359 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 BDKRB1P46663 353 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 MRPL19P49406 292 aaKnown RBP4.37□□□□□ -1.71
GABPB1-204ENST00000396464 GDI2P50395 445 aaKnown RBP4.37□□□□□ -1.71
GABPB1-204ENST00000396464 UCNP55089 124 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 RAG2P55895 527 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 RPS18P62269 152 aaKnown RBP4.37□□□□□ -1.71
GABPB1-204ENST00000396464 KCNJ2P63252 427 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 VGLL4Q14135 290 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 CASP8Q14790 479 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 ZNF74Q16587 644 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 SRSF7Q16629 238 aaKnown RBP eCLIP4.37□□□□□ -1.71
GABPB1-204ENST00000396464 PTPN20Q4JDL3 420 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 TCHHL1Q5QJ38 904 aaPredicted RBP4.37□□□□□ -1.71
GABPB1-204ENST00000396464 BEND6Q5SZJ8 279 aaPredicted RBP4.37□□□□□ -1.71
GABPB1-204ENST00000396464 TIGD3Q6B0B8 471 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 ACSM5Q6NUN0 579 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 RFWD3Q6PCD5 774 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 FAM151BQ6UXP7 276 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 ZNF788Q6ZQV5 615 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 Q71RC1 249 aaPredicted RBP4.37□□□□□ -1.71
GABPB1-204ENST00000396464 FAM57BQ71RH2 274 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 ZNF546Q86UE3 836 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 ERICH1Q86X53 443 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 PRR26Q8N8Z3 221 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 SNX31Q8N9S9 440 aa4.37□□□□□ -1.71
GABPB1-204ENST00000396464 DMBX1Q8NFW5 382 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms