RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 SAP18O00422 153 aaKnown RBP3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 TAPBPO15533 448 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 LRRTM2O43300 516 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 LATO43561 262 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 LCMT2O60294 686 aaKnown RBP3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 TPST2O60704 377 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 HPP00738 406 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 HOXD4P09016 255 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 H2BFMP0C1H6 154 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 UBTFL6P0CB48 400 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 CT45A10P0DMU9 189 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 PNMTP11086 282 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 NCK1P16333 377 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 HOXB6P17509 224 aaKnown RBP3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 PTBP1P26599 531 aaKnown RBP eCLIP3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 CDH5P33151 784 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 GNPDA1P46926 289 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 ARHGDIBP52566 201 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 AP3M2P53677 418 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 RND3P61587 244 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 RAB40BQ12829 278 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 TRDNQ13061 729 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 WDR43Q15061 677 aaKnown RBP eCLIP3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 STK11Q15831 433 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 CYP51A1Q16850 503 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 CNPY1Q3B7I2 92 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 PHYHD1Q5SRE7 291 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 PAQR6Q6TCH4 344 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 Q6ZPB1 254 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 C16orf62Q7Z3J2 963 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 MOB3BQ86TA1 216 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 SLC47A2Q86VL8 602 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 SLC22A18ASQ8N1D0 253 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 CLEC4FQ8N1N0 589 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 PDCL2Q8N4E4 241 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 BBOF1Q8ND07 529 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 C17orf47Q8NEP4 570 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 FBXO32Q969P5 355 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 ATP6V1G3Q96LB4 118 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 ZNF599Q96NL3 588 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 CRNKL1Q9BZJ0 848 aaKnown RBP3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 LRRN3Q9H3W5 708 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 EHD1Q9H4M9 534 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 METTL7AQ9H8H3 244 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 SLC17A5Q9NRA2 495 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 GLRX2Q9NS18 164 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 EHFQ9NZC4 300 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 IL36GQ9NZH8 169 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 WRAP73Q9P2S5 460 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 ONECUT1Q9UBC0 465 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 SLC2A6Q9UGQ3 507 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 PSME2Q9UL46 239 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 RPH3ALQ9UNE2 315 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 POLDIP2Q9Y2S7 368 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 OARD1Q9Y530 152 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 LOC100653049A0A140TA62 436 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 LRP5LA4QPB2 252 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 NPIPA7E9PJI5 369 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 FOXE1O00358 373 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 SLC17A2O00624 439 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 NBR2O15453 112 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 RNF113AO15541 343 aaKnown RBP3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 ZNF264O43296 627 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 FCMRO60667 390 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 ZNF253O75346 499 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 KRT34O76011 436 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 SERPINA3P01011 423 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 ASGR1P07306 291 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 ZNF853P0CG23 659 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 NPIPA8P0DM63 369 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 CD80P33681 288 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 HSD17B2P37059 387 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 SPAG1Q07617 926 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 PUDPQ08623 228 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 FGL1Q08830 312 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 RIPPLY1Q0D2K3 151 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 GANABQ14697 944 aaKnown RBP3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 PPP1R3AQ16821 1122 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 KCTD21Q4G0X4 260 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 TP53I3Q53FA7 332 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 FBXO48Q5FWF7 155 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 FAHD2BQ6P2I3 314 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 TMUB2Q71RG4 321 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 NLRP9Q7RTR0 991 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 TAS2R42Q7RTR8 314 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 APTXQ7Z2E3 356 aaKnown RBP3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 OR51G2Q8NGK0 314 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 AGR3Q8TD06 166 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 ZNF689Q96CS4 500 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 FAHD2AQ96GK7 314 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 TMEM80Q96HE8 168 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 MTMR9Q96QG7 549 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 RANBP9Q96S59 729 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 CCNL2Q96S94 520 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 VGLL1Q99990 258 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 KRTAP1-5Q9BYS1 174 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 XKR8Q9H6D3 395 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 IL20Q9NYY1 176 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 DHRS4-AS1Q9P1J3 65 aa3.93□□□□□ -1.78
HMGB1P10-201ENST00000395823 CDH9Q9ULB4 789 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms