RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 CRISP1P54107 249 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 PNLIPRP2P54317 469 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 NUP107P57740 925 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 APOFQ13790 326 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 MEP1AQ16819 746 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 CTU2Q2VPK5 515 aaKnown RBP22.53■■□□□ 1.2
CTF1-202ENST00000395019 C6orf141Q5SZD1 244 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 CCDC71Q8IV32 467 aaPredicted RBP22.53■■□□□ 1.2
CTF1-202ENST00000395019 APLFQ8IW19 511 aaPredicted RBP22.53■■□□□ 1.2
CTF1-202ENST00000395019 ZNF440Q8IYI8 595 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 AMER2Q8N7J2 671 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 FAM71CQ8NEG0 241 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 TSPAN14Q8NG11 270 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 GNPDA2Q8TDQ7 276 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 PRSS27Q9BQR3 290 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 PADI1Q9ULC6 663 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 NCOR2Q9Y618 2525 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 NGFRP08138 427 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 CHMP24386 653 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 TGIF1Q15583 401 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 RBM48Q5RL73 367 aaKnown RBP22.53■■□□□ 1.2
CTF1-202ENST00000395019 Q6ZPB1 254 aaPredicted RBP22.53■■□□□ 1.2
CTF1-202ENST00000395019 MBOAT2Q6ZWT7 520 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 RRM2BQ7LG56 351 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 PRICKLE2Q7Z3G6 844 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 LSMEM1Q8N8F7 131 aa22.53■■□□□ 1.2
CTF1-202ENST00000395019 TRBV11-1A0A0K0K1C0 115 aa22.52■■□□□ 1.2
CTF1-202ENST00000395019 MED19A0JLT2 244 aaPredicted RBP22.52■■□□□ 1.2
CTF1-202ENST00000395019 A6NHS1 94 aa22.52■■□□□ 1.2
CTF1-202ENST00000395019 STMND1H3BQB6 276 aa22.52■■□□□ 1.2
CTF1-202ENST00000395019 RAD1O60671 282 aa22.52■■□□□ 1.2
CTF1-202ENST00000395019 ADAM11O75078 769 aa22.52■■□□□ 1.2
CTF1-202ENST00000395019 GSTM3P21266 225 aa22.52■■□□□ 1.2
CTF1-202ENST00000395019 ALDH6A1Q02252 535 aaKnown RBP22.52■■□□□ 1.2
CTF1-202ENST00000395019 CDK5R2Q13319 367 aa22.52■■□□□ 1.2
CTF1-202ENST00000395019 PCOLCEQ15113 449 aa22.52■■□□□ 1.2
CTF1-202ENST00000395019 OR5L2Q8NGL0 311 aa22.52■■□□□ 1.2
CTF1-202ENST00000395019 PIGXQ8TBF5 258 aa22.52■■□□□ 1.2
CTF1-202ENST00000395019 CFAP47Q6ZTR5 3102 aa22.51■■□□□ 1.19
CTF1-202ENST00000395019 A0A0B4J2E0 115 aa22.51■■□□□ 1.19
CTF1-202ENST00000395019 A0A1B0GX12 115 aa22.51■■□□□ 1.19
CTF1-202ENST00000395019 ZAR1LA6NP61 321 aa22.51■■□□□ 1.19
CTF1-202ENST00000395019 ICOSLGO75144 302 aa22.51■■□□□ 1.19
CTF1-202ENST00000395019 OMPP47874 163 aa22.51■■□□□ 1.19
CTF1-202ENST00000395019 NRG3P56975 720 aa22.51■■□□□ 1.19
CTF1-202ENST00000395019 TOP3AQ13472 1001 aaPredicted RBP22.51■■□□□ 1.19
CTF1-202ENST00000395019 PTGES3Q15185 160 aaKnown RBP22.51■■□□□ 1.19
CTF1-202ENST00000395019 CD226Q15762 336 aa22.51■■□□□ 1.19
CTF1-202ENST00000395019 LAIR2Q6ISS4 152 aa22.51■■□□□ 1.19
CTF1-202ENST00000395019 APOOLQ6UXV4 268 aa22.51■■□□□ 1.19
CTF1-202ENST00000395019 NLGN4XQ8N0W4 816 aa22.51■■□□□ 1.19
CTF1-202ENST00000395019 NLGN4YQ8NFZ3 816 aaPredicted RBP22.51■■□□□ 1.19
CTF1-202ENST00000395019 CT55Q8WUE5 264 aa22.51■■□□□ 1.19
CTF1-202ENST00000395019 TMEM255BQ8WV15 326 aa22.51■■□□□ 1.19
CTF1-202ENST00000395019 GPA33Q99795 319 aa22.51■■□□□ 1.19
CTF1-202ENST00000395019 EXOSC3Q9NQT5 275 aaKnown RBP22.51■■□□□ 1.19
CTF1-202ENST00000395019 DMXL2Q8TDJ6 3036 aa22.5■■□□□ 1.19
CTF1-202ENST00000395019 LAMA5O15230 3695 aa22.5■■□□□ 1.19
CTF1-202ENST00000395019 ZFAND5O76080 213 aa22.5■■□□□ 1.19
CTF1-202ENST00000395019 NTN1O95631 604 aa22.5■■□□□ 1.19
CTF1-202ENST00000395019 FOLR3P41439 243 aa22.5■■□□□ 1.19
CTF1-202ENST00000395019 GSSP48637 474 aa22.5■■□□□ 1.19
CTF1-202ENST00000395019 MAD2L1BPQ15013 274 aaPredicted RBP22.5■■□□□ 1.19
CTF1-202ENST00000395019 TBC1D25Q3MII6 688 aa22.5■■□□□ 1.19
CTF1-202ENST00000395019 DTX1Q86Y01 620 aa22.5■■□□□ 1.19
CTF1-202ENST00000395019 RNF113BQ8IZP6 322 aaKnown RBP22.5■■□□□ 1.19
CTF1-202ENST00000395019 ZNF700Q9H0M5 742 aa22.5■■□□□ 1.19
CTF1-202ENST00000395019 LIN28AQ9H9Z2 209 aaKnown RBP22.5■■□□□ 1.19
CTF1-202ENST00000395019 A0A1B0GWA3 101 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 A0A1W2PQD3 144 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 DPPA5A6NC42 116 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 OR6C70A6NIJ9 312 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 TMEM200CA6NKL6 621 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.49■■□□□ 1.19
CTF1-202ENST00000395019 CHP2O43745 196 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 CLPTM1O96005 669 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 IGHEP01854 428 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 TP53P04637 393 aaPredicted RBP22.49■■□□□ 1.19
CTF1-202ENST00000395019 RAB40ALP0C0E4 278 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 UBL4AP11441 157 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 F8A1P23610 371 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 TUBA4AP68366 448 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 TSPAN31Q12999 210 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 NDUFAF6Q330K2 333 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 DESI1Q6ICB0 168 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 WDR88Q6ZMY6 472 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 PHOSPHO1Q8TCT1 267 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 NKD1Q969G9 470 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 KRCC1Q9NPI7 259 aaPredicted RBP22.49■■□□□ 1.19
CTF1-202ENST00000395019 TUBA8Q9NY65 449 aaPredicted RBP22.49■■□□□ 1.19
CTF1-202ENST00000395019 NPFFR2Q9Y5X5 522 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 IGHV1-45A0A0A0MS14 117 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 LOC101059948A0A1B0GTJ6 334 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 ALG1L2C9J202 215 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 SMNDC1O75940 238 aaKnown RBP eCLIP22.49■■□□□ 1.19
CTF1-202ENST00000395019 CRHBPP24387 322 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 STAT5AP42229 794 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 HLCSP50747 726 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 NRMQ8IXM6 262 aa22.49■■□□□ 1.19
CTF1-202ENST00000395019 ENTHD1Q8IYW4 607 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms